Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 AC082651.2-201ENST00000496833 166 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 HIGD1AP14-201ENST00000507617 282 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 AC104108.1-201ENST00000509930 412 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 SNORA3.4-201ENST00000515969 96 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 YWHABP2-201ENST00000540201 713 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 BNIP3P1-201ENST00000547295 580 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS50Q96JG6 BNIP3P4-201ENST00000604946 565 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 AL021707.7-201ENST00000607991 416 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 AC000068.2-201ENST00000608816 460 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 AL596275.2-204ENST00000641628 552 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 AL596275.2-206ENST00000641957 626 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS50Q96JG6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 AC010329.2-201ENST00000595195 2737 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 CASC19-204ENST00000641001 2055 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 AC000367.1-201ENST00000452711 1766 ntBASIC5.14□□□□□ -1.59
VPS50Q96JG6 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS50Q96JG6 BX005019.1-201ENST00000561881 1810 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 CASC19-284ENST00000642142 1868 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 HSPA8P18-201ENST00000439846 1928 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 AP000542.2-201ENST00000623199 6179 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 SNORD113-6-201ENST00000363345 75 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 SNORA62.2-201ENST00000364672 152 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 SNORA48.4-201ENST00000391089 134 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AL079342.2-201ENST00000403367 482 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC092745.2-202ENST00000411880 369 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 EXTL2P1-201ENST00000446218 416 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC096741.1-201ENST00000472250 846 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 RN7SL799P-201ENST00000475891 298 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 RPL21P6-201ENST00000479171 504 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC079841.1-201ENST00000481228 950 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 BET1P1-201ENST00000482276 359 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC104687.1-201ENST00000485829 412 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC010486.3-201ENST00000511602 785 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 EIF3KP3-201ENST00000514461 639 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 Y_RNA.688-201ENST00000516565 95 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 BLZF2P-201ENST00000553776 1130 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 NPM1P47-201ENST00000560843 856 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC090695.1-201ENST00000561269 1222 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 MIR5708-201ENST00000579723 85 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS50Q96JG6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC080013.6-201ENST00000606185 215 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 AP000238.1-201ENST00000608759 426 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC015908.5-201ENST00000623289 343 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 CASC19-222ENST00000641321 1173 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS50Q96JG6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS50Q96JG6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS50Q96JG6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC104454.1-201ENST00000421341 1401 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 MAPK10-263ENST00000641052 4307 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms