Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC008562.1-201ENST00000521763 330 ntBASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFT1Q96AA3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 ABI1P1-201ENST00000603375 1120 ntBASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC095055.1-201ENST00000603472 1113 ntBASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC005377.1-201ENST00000605126 456 ntBASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC024933.1-201ENST00000608472 348 ntBASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC096586.1-201ENST00000610267 561 ntBASIC4.23□□□□□ -1.73
RFT1Q96AA3 AC008115.4-201ENST00000619780 775 ntBASIC4.23□□□□□ -1.73
RFT1Q96AA3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFT1Q96AA3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFT1Q96AA3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RFT1Q96AA3 OR11H5P-202ENST00000641612 1325 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFT1Q96AA3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 USP9YP4-201ENST00000424401 1745 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 MIR143-201ENST00000385300 106 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 AL080315.1-201ENST00000406055 466 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 AL450992.3-201ENST00000413192 568 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RFT1Q96AA3 MTND2P9-201ENST00000422293 931 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RFT1Q96AA3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 RPS6P12-201ENST00000432491 726 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 MTND6P6-201ENST00000478031 263 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC093270.2-201ENST00000486157 792 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 HMGN2P25-201ENST00000486956 268 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 COX6B1P6-201ENST00000522347 255 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 IGKV2-18-201ENST00000522607 343 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC090751.1-201ENST00000566966 267 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 ATP5F1P7-201ENST00000567330 760 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AL512329.2-201ENST00000607350 548 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC026368.1-201ENST00000614934 690 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC138907.10-201ENST00000623708 983 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 ATE1-AS1-202ENST00000636460 506 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFT1Q96AA3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFT1Q96AA3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFT1Q96AA3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AC134882.1-201ENST00000603738 1676 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AL031119.1-201ENST00000404707 1879 ntBASIC4.22□□□□□ -1.73
RFT1Q96AA3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
RFT1Q96AA3 AL049737.1-201ENST00000413920 1403 ntBASIC4.21□□□□□ -1.73
RFT1Q96AA3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RFT1Q96AA3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RFT1Q96AA3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
RFT1Q96AA3 RNU6-468P-201ENST00000384003 109 ntBASIC4.21□□□□□ -1.74
RFT1Q96AA3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RFT1Q96AA3 AL035405.1-201ENST00000400795 710 ntBASIC4.21□□□□□ -1.74
RFT1Q96AA3 MIR921-201ENST00000401133 56 ntBASIC4.21□□□□□ -1.74
RFT1Q96AA3 AL357515.1-201ENST00000402967 542 ntBASIC4.21□□□□□ -1.74
RFT1Q96AA3 MTATP6P31-201ENST00000406985 692 ntBASIC4.21□□□□□ -1.74
RFT1Q96AA3 SNORA11.5-201ENST00000408163 128 ntBASIC4.21□□□□□ -1.74
RFT1Q96AA3 AC092745.2-202ENST00000411880 369 ntBASIC4.21□□□□□ -1.74
RFT1Q96AA3 AL160275.2-201ENST00000412010 394 ntBASIC4.21□□□□□ -1.74
RFT1Q96AA3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.21□□□□□ -1.74
RFT1Q96AA3 GTF3AP1-201ENST00000416942 1004 ntBASIC4.21□□□□□ -1.74
RFT1Q96AA3 OR2AM1P-201ENST00000422137 422 ntBASIC4.21□□□□□ -1.74
RFT1Q96AA3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms