Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNU4-92P-201ENST00000363783 136 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 RNU6-304P-201ENST00000364855 107 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 TAS2R15P-201ENST00000390674 928 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AL079342.2-201ENST00000403367 482 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 RNU2-6P-201ENST00000411404 190 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 GTF2IP5-201ENST00000414608 731 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC073069.1-201ENST00000428657 441 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 FHP1-201ENST00000442741 703 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 MTND1P31-201ENST00000449206 961 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 TCEA1P1-201ENST00000449716 880 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 RNU6-1218P-201ENST00000458990 108 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC005410.1-202ENST00000460347 485 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC006967.1-201ENST00000467608 589 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 RPS24P16-201ENST00000497294 392 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 GAPDHP56-201ENST00000506031 988 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC010285.3-201ENST00000511668 676 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 MTND4P33-201ENST00000556706 766 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC090888.2-201ENST00000559765 1144 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC209154.1-201ENST00000582156 337 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC090312.2-201ENST00000582687 378 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC068790.4-201ENST00000602474 263 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 MTND3P19-201ENST00000603825 345 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AL355493.4-201ENST00000618530 292 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AP000473.2-201ENST00000602659 1537 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC009313.2-201ENST00000417893 1941 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 RN7SKP185-201ENST00000362813 326 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 RNA5SP113-201ENST00000410486 84 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 RPS24P7-201ENST00000416921 246 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 COX6CP17-201ENST00000421389 185 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 RPF2P1-201ENST00000424137 906 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AL009174.1-201ENST00000426577 416 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 VTI1BP4-201ENST00000427516 527 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 DYNLL1P7-201ENST00000429273 258 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 OR1H1P-201ENST00000448731 937 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC243772.1-201ENST00000451620 410 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 MTCO2P6-201ENST00000463134 685 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 PRDX3P4-201ENST00000470828 747 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 RPL23AP71-201ENST00000470966 469 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC011037.1-201ENST00000483964 558 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 RPSAP51-201ENST00000497462 645 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 OR4U1P-201ENST00000554958 912 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC009097.3-201ENST00000563557 1018 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC023813.2-201ENST00000564321 469 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 MTND3P13-201ENST00000574391 343 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC015688.2-201ENST00000584523 262 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 VN1R83P-201ENST00000595685 445 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC245036.5-201ENST00000596330 847 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AL392112.1-201ENST00000605115 829 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC107952.2-201ENST00000606048 486 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AP005432.2-201ENST00000608162 586 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AP000238.1-201ENST00000608759 426 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AP001521.2-201ENST00000608772 546 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 MIR6780A-201ENST00000615089 68 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC013470.4-201ENST00000619978 986 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC012414.7-202ENST00000622705 1090 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 FRG1EP-201ENST00000634469 770 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC112198.2-201ENST00000426589 6996 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms