Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 MIR223-201ENST00000385204 110 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 MIR92A2-201ENST00000385299 75 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 RPS23P10-201ENST00000416185 486 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 ARL2BPP3-201ENST00000421226 480 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AL160175.1-201ENST00000428124 247 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AL391987.1-201ENST00000441025 200 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 RPL7P33-201ENST00000444159 742 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 DDX39BP2-208ENST00000453923 258 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AURKAPS2-201ENST00000454983 333 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 MTND2P6-201ENST00000455337 1030 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 CYCSP53-201ENST00000455540 265 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC005229.2-201ENST00000456995 399 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 RN7SL172P-201ENST00000460535 303 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC093663.2-201ENST00000484625 313 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC106872.2-201ENST00000494303 480 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 RNU6-1004P-201ENST00000516584 111 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC020978.7-201ENST00000575953 1187 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 MIR3908-201ENST00000579798 126 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC055764.2-201ENST00000610089 670 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 MIR6861-201ENST00000618657 64 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC105074.1-201ENST00000623380 3095 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 MARK2P15-201ENST00000432204 2186 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC139769.1-204ENST00000472297 1931 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 RNA5SP242-201ENST00000364171 118 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 RNA5SP151-201ENST00000365632 117 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 RHOT1P2-201ENST00000366423 333 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 RNU6-452P-201ENST00000384406 107 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 SNORA40.4-201ENST00000390971 128 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 RNA5SP498-201ENST00000411342 120 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC105402.1-201ENST00000413336 545 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 MTCO3P21-201ENST00000430791 643 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 RPS29P14-201ENST00000431518 171 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 PRELID3BP10-201ENST00000431957 584 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 RPL17P35-201ENST00000432217 549 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 MTCO1P52-201ENST00000433928 531 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 HLA-N-201ENST00000437516 135 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC104306.1-201ENST00000449702 371 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC010683.1-201ENST00000473673 378 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC090114.3-201ENST00000479267 829 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC011037.1-201ENST00000483964 558 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC005912.1-201ENST00000495392 255 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC010627.1-201ENST00000503819 1294 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 SCARNA21.2-201ENST00000516600 166 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 TOMM20P2-201ENST00000540082 421 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC093014.1-201ENST00000548926 724 ntBASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC71LQ8N9Z2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms