Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AL139344.1-201ENST00000605228 195 ntBASIC5.22□□□□□ -1.57
KRT78Q8N1N4 AL158042.1-201ENST00000605338 460 ntBASIC5.22□□□□□ -1.57
KRT78Q8N1N4 AC064807.4-201ENST00000607201 407 ntBASIC5.22□□□□□ -1.57
KRT78Q8N1N4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 AC010632.3-201ENST00000611377 369 ntBASIC5.22□□□□□ -1.57
KRT78Q8N1N4 SNORA17.5-201ENST00000630429 132 ntBASIC5.22□□□□□ -1.57
KRT78Q8N1N4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRT78Q8N1N4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.21□□□□□ -1.57
KRT78Q8N1N4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
KRT78Q8N1N4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.21□□□□□ -1.57
KRT78Q8N1N4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.21□□□□□ -1.57
KRT78Q8N1N4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 PCAT14-202ENST00000627127 3935 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 RNA5SP391-201ENST00000363456 119 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 RN7SKP124-201ENST00000364730 341 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AL121978.1-201ENST00000402778 359 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 BOLA3P4-201ENST00000418151 400 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 MTCO3P1-205ENST00000422088 832 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC104843.2-201ENST00000427666 297 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC023347.2-201ENST00000433994 462 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 RPS11P7-201ENST00000442125 465 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 RN7SL273P-201ENST00000481561 299 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC022133.1-201ENST00000490961 571 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 FTH1P24-201ENST00000503502 462 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC073358.1-201ENST00000505671 684 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC025674.1-201ENST00000507074 324 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AL671862.1-201ENST00000515851 349 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 RN7SL356P-201ENST00000582228 248 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AL031281.1-201ENST00000604049 488 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC104695.2-201ENST00000605056 775 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC010245.2-201ENST00000606908 1167 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC131235.4-201ENST00000609288 620 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC005332.6-201ENST00000613178 446 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC007204.2-201ENST00000615022 616 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC026124.2-201ENST00000621847 656 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC131159.1-201ENST00000621854 213 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC078883.4-201ENST00000623218 367 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC116618.1-201ENST00000634617 774 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC107081.3-201ENST00000612715 2034 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 AC235565.1-201ENST00000456962 1325 ntBASIC5.21□□□□□ -1.58
KRT78Q8N1N4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.21□□□□□ -1.58
KRT78Q8N1N4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 RNU1-19P-201ENST00000363306 165 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms