Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC005412.2-201ENST00000492004 341 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC020699.1-201ENST00000505161 445 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC137768.1-201ENST00000549998 553 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 NDUFB4P11-201ENST00000560510 395 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC018552.1-201ENST00000562099 811 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 CYP2C60P-201ENST00000566088 139 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 UBE2FP2-201ENST00000566646 462 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 RN7SL435P-201ENST00000584418 282 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC108359.1-201ENST00000616451 1211 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AC019206.1-201ENST00000621938 425 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 STX3-208ENST00000641815 3236 ntBASIC4.58□□□□□ -1.68
BEST3Q8N1M1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.58□□□□□ -1.68
BEST3Q8N1M1 AL022393.1-201ENST00000625142 1677 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC012618.3-205ENST00000637896 1496 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 MTND4P31-201ENST00000425607 1343 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 RNA5SP191-201ENST00000362585 102 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 MIR525-201ENST00000384978 85 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AL590290.1-201ENST00000405336 380 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AL592310.1-201ENST00000414330 671 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC092648.1-201ENST00000425870 423 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 CDY14P-201ENST00000431260 1014 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 CDY12P-201ENST00000440679 1015 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 TXNP5-201ENST00000441043 315 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 CDY13P-201ENST00000445813 1015 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 CDY23P-201ENST00000451661 1014 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 HMGB1P4-201ENST00000455362 567 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 RPL23AP37-201ENST00000479658 549 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC098862.1-201ENST00000504991 413 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC113420.1-201ENST00000507903 571 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC026407.1-201ENST00000518369 204 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC023824.3-201ENST00000569003 562 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 TVP23CP2-201ENST00000571473 623 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 MTATP6P24-201ENST00000576835 677 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 DPRXP4-201ENST00000578053 568 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 MIR4270-201ENST00000581799 70 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 EIF1P6-201ENST00000600054 334 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC020910.3-201ENST00000603701 874 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AL450336.1-201ENST00000605180 586 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AL161616.1-201ENST00000611867 286 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 AC140725.3-201ENST00000616193 880 ntBASIC4.57□□□□□ -1.68
BEST3Q8N1M1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms