Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 RPL26P29-201ENST00000415623 438 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 RAC1P3-201ENST00000416129 580 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 DYNLL1P7-201ENST00000429273 258 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC068287.1-201ENST00000430283 295 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 RPS29P17-201ENST00000430795 166 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 MAPRE1P3-201ENST00000435438 796 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 RPL23AP81-201ENST00000455252 467 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 RPL23AP2-201ENST00000471227 466 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC096741.1-201ENST00000472250 846 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC013356.1-201ENST00000489027 564 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC104164.2-201ENST00000496953 495 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC108145.1-201ENST00000503770 153 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC135001.1-201ENST00000544546 283 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC138473.1-201ENST00000605717 526 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AC015813.4-201ENST00000610469 179 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AL669942.2-201ENST00000620352 697 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 AL445437.1-201ENST00000623157 3087 ntBASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 AC139713.2-214ENST00000642059 1811 ntBASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 IGKV7-3-201ENST00000357453 298 ntBASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 AL583835.1-201ENST00000399570 407 ntBASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 DPY19L1P2-201ENST00000426647 915 ntBASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 OR7L1P-201ENST00000456181 380 ntBASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 AP001804.2-201ENST00000533932 910 ntBASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 CR383656.6-201ENST00000550518 394 ntBASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 AL356218.2-201ENST00000605264 187 ntBASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 AL592437.2-201ENST00000421655 2434 ntBASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC65Q8IXS2 BX005019.1-201ENST00000561881 1810 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 Y_RNA.62-201ENST00000362840 99 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 RAB9AP4-201ENST00000415230 609 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 P2RY10P2-201ENST00000416730 913 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 AL157831.1-201ENST00000426134 473 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 CEACAMP9-201ENST00000442990 513 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 AL592156.1-201ENST00000508758 304 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 RNA5SP73-201ENST00000516744 108 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 CYP4A43P-201ENST00000568156 121 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 MIR5096-201ENST00000583713 70 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 MIR6820-201ENST00000611508 62 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 AC068254.2-201ENST00000623938 3577 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 AL158163.1-201ENST00000603915 1649 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 AC010329.2-201ENST00000595195 2737 ntBASIC4.74□□□□□ -1.65
CCDC65Q8IXS2 AP000756.2-201ENST00000624168 2567 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 NOL8P1-201ENST00000508336 3529 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms