Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 SNORA70.17-201ENST00000516449 133 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 AC104997.1-201ENST00000519761 717 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 AC084373.1-201ENST00000603311 235 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 AC079587.1-201ENST00000603846 277 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 AL445222.1-201ENST00000607259 628 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 AC064801.1-201ENST00000612025 407 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 AL133243.1-201ENST00000614487 366 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 AL021997.2-201ENST00000615674 271 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 MIR7702-201ENST00000621931 59 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 MAPK10-253ENST00000641010 4072 ntBASIC4.25□□□□□ -1.73
NUDCD3Q8IVD9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 Z73965.1-201ENST00000623412 2297 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 RN7SKP278-201ENST00000410504 342 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC244453.4-201ENST00000419150 388 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC092647.1-201ENST00000420654 287 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 CEACAMP1-201ENST00000434624 1035 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 VN1R48P-201ENST00000448149 1036 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC011005.3-201ENST00000491624 395 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC104164.2-201ENST00000496953 495 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC090281.1-201ENST00000523019 276 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC006064.5-201ENST00000541782 248 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AL109766.1-201ENST00000555080 552 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC091042.1-201ENST00000579213 173 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC211433.2-201ENST00000608433 387 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC103858.2-201ENST00000621471 543 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC000123.2-201ENST00000623124 461 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC019080.5-201ENST00000624891 757 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 MIR6715B-201ENST00000637172 77 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 MTCO1P8-201ENST00000416914 1523 ntBASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NUDCD3Q8IVD9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 RNA5SP175-201ENST00000364275 119 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 MIR105-2-201ENST00000385083 81 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 RNA5SP397-201ENST00000391323 118 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 DPY19L1P2-201ENST00000426647 915 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 RPL31P44-201ENST00000447680 377 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC104306.1-201ENST00000449702 371 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC091685.2-201ENST00000454924 864 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 RPL5P13-201ENST00000462840 709 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC053481.1-201ENST00000467217 306 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 SYT14P1-201ENST00000481459 721 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC004453.1-201ENST00000487895 408 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC008638.1-201ENST00000506035 866 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 OR7E10P-201ENST00000526420 991 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AP000827.1-201ENST00000527814 258 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AP001781.1-201ENST00000530977 207 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms