Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RPS27AP6-201ENST00000427962 448 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 USP9YP35-201ENST00000435696 412 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 MTND3P1-201ENST00000441336 220 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 NOP56P2-201ENST00000447491 769 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC090804.1-201ENST00000448870 490 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 RPL7P1-201ENST00000468161 747 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 RPL7P9-201ENST00000468715 747 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 RN7SL447P-201ENST00000494711 245 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 RPL15P21-201ENST00000495592 567 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC084024.2-201ENST00000503480 791 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 RPL37P25-201ENST00000507308 276 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 RNU6-405P-201ENST00000516637 110 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 RNU6-528P-201ENST00000516926 100 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC109635.3-201ENST00000529536 185 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AP001317.1-201ENST00000531194 960 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 BMS1P7-201ENST00000602440 1052 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC128687.1-201ENST00000605304 619 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AP002360.3-201ENST00000607673 710 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AL451074.6-201ENST00000608512 729 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC097505.1-201ENST00000610199 565 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 MIR6768-201ENST00000610734 72 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC010678.1-201ENST00000614118 713 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC013476.2-201ENST00000614456 459 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC026368.1-201ENST00000614934 690 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 MIR6886-201ENST00000619864 61 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 AC008443.7-201ENST00000622195 246 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 SAMMSON-209ENST00000641222 1100 ntBASIC5.21□□□□□ -1.58
VRK3Q8IV63 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VRK3Q8IV63 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VRK3Q8IV63 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VRK3Q8IV63 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC006484.1-201ENST00000435086 1884 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AL355852.1-201ENST00000454081 1771 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 RNU6-931P-201ENST00000363850 107 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 RNU1-146P-201ENST00000364015 165 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 RNU6-353P-201ENST00000364266 108 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 Y_RNA.359-201ENST00000365498 102 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VRK3Q8IV63 RPL26P37-201ENST00000411983 438 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AL161449.1-201ENST00000414531 1199 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 RPS27AP7-201ENST00000422792 455 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 MGAT2P2-201ENST00000427194 797 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 RPL7AP49-201ENST00000429522 581 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AL591438.1-201ENST00000433508 581 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AL596276.1-201ENST00000434465 418 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AL353898.1-201ENST00000444055 238 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 UBE2V1P7-201ENST00000446395 340 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 VN1R34P-201ENST00000447387 883 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC093392.2-201ENST00000450682 337 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 HMGB1P5-202ENST00000451497 985 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC108161.1-201ENST00000461060 402 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 MTCO3P38-201ENST00000468910 766 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 RPS26P39-201ENST00000469206 341 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 AC104971.1-201ENST00000495117 578 ntBASIC5.2□□□□□ -1.58
VRK3Q8IV63 MTND2P33-201ENST00000506452 1031 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms