Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL118556.2-201ENST00000614375 824 ntBASIC4.17□□□□□ -1.74
NIPAL3Q6P499 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.17□□□□□ -1.74
NIPAL3Q6P499 AC100827.5-201ENST00000615883 426 ntBASIC4.17□□□□□ -1.74
NIPAL3Q6P499 AL645927.2-201ENST00000618350 349 ntBASIC4.17□□□□□ -1.74
NIPAL3Q6P499 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.17□□□□□ -1.74
NIPAL3Q6P499 AC087190.4-201ENST00000574616 8334 ntBASIC4.17□□□□□ -1.74
NIPAL3Q6P499 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NIPAL3Q6P499 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
NIPAL3Q6P499 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.17□□□□□ -1.74
NIPAL3Q6P499 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC120338.1-201ENST00000625074 1541 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 USP9YP4-201ENST00000424401 1745 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 RNA5SP151-201ENST00000365632 117 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 RNA5SP87-201ENST00000384155 118 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 MIR298-201ENST00000401212 88 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 RN7SKP167-201ENST00000411047 285 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 ARL2BPP3-201ENST00000421226 480 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 MTCO3P43-201ENST00000440974 771 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 TPTE2P6-202ENST00000445572 1007 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC092685.1-201ENST00000447960 1243 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC006967.1-201ENST00000467608 589 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC012158.1-204ENST00000483430 465 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 IGKV2-36-201ENST00000519999 223 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC090151.1-201ENST00000520784 730 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC100770.1-201ENST00000532310 322 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AL110118.1-201ENST00000553543 400 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 SNRPGP1-201ENST00000553864 222 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 MTND4LP24-201ENST00000572277 291 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 MIR4270-201ENST00000581799 70 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC018618.2-201ENST00000604770 446 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC055839.1-201ENST00000634467 498 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AL592437.2-201ENST00000421655 2434 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 AC092162.3-201ENST00000624511 1624 ntBASIC4.16□□□□□ -1.74
NIPAL3Q6P499 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.16□□□□□ -1.74
NIPAL3Q6P499 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NIPAL3Q6P499 MTND4P21-201ENST00000453886 1357 ntBASIC4.15□□□□□ -1.74
NIPAL3Q6P499 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NIPAL3Q6P499 AC091046.3-201ENST00000631455 1574 ntBASIC4.15□□□□□ -1.74
NIPAL3Q6P499 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.15□□□□□ -1.74
NIPAL3Q6P499 AC010928.1-201ENST00000592477 1447 ntBASIC4.15□□□□□ -1.74
NIPAL3Q6P499 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
NIPAL3Q6P499 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 Z98745.1-201ENST00000402553 494 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AC140479.3-201ENST00000418944 1126 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AL049745.1-201ENST00000433953 286 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 FTH1P16-201ENST00000435241 552 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 BTBD7P2-201ENST00000441962 620 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AC011005.3-201ENST00000491624 395 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AC023050.1-201ENST00000498198 304 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AC098799.3-201ENST00000506095 438 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AC134698.5-201ENST00000519444 336 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AC090819.1-201ENST00000523800 1111 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AP003117.1-201ENST00000602771 554 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AC023762.1-201ENST00000603280 584 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AC093765.1-201ENST00000603758 881 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AL450270.1-201ENST00000606160 391 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 MIR1264-201ENST00000616374 69 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AC023509.5-201ENST00000617434 807 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 AP006248.2-201ENST00000623309 592 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 HPVC1-201ENST00000629899 1198 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms