Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.74□□□□□ -1.81
USF2Q15853 MTCO1P30-201ENST00000515244 580 ntBASIC3.74□□□□□ -1.81
USF2Q15853 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.74□□□□□ -1.81
USF2Q15853 MIR2114-201ENST00000516645 80 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AC022832.1-201ENST00000530718 645 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.74□□□□□ -1.81
USF2Q15853 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.74□□□□□ -1.81
USF2Q15853 AL049839.1-201ENST00000556151 657 ntBASIC3.74□□□□□ -1.81
USF2Q15853 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.74□□□□□ -1.81
USF2Q15853 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.74□□□□□ -1.81
USF2Q15853 AC016180.1-201ENST00000567945 403 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AP000919.1-202ENST00000581139 1264 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.74□□□□□ -1.81
USF2Q15853 PCNAP1-202ENST00000595299 752 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AC007687.1-201ENST00000602704 304 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AC012557.1-201ENST00000607115 611 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AC093799.2-201ENST00000610062 578 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AL121612.2-201ENST00000612261 482 ntBASIC3.74□□□□□ -1.81
USF2Q15853 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 AC015804.1-201ENST00000622935 435 ntBASIC3.74□□□□□ -1.81
USF2Q15853 AL353662.3-201ENST00000625131 237 ntBASIC3.74□□□□□ -1.81
USF2Q15853 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.74□□□□□ -1.81
USF2Q15853 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF2Q15853 AL627171.1-201ENST00000618845 1308 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AC015813.6-201ENST00000624409 5808 ntBASIC3.73□□□□□ -1.81
USF2Q15853 SNORA74A-201ENST00000364089 198 ntBASIC3.73□□□□□ -1.81
USF2Q15853 RNU6-31P-201ENST00000384388 108 ntBASIC3.73□□□□□ -1.81
USF2Q15853 RNA5SP345-201ENST00000410646 108 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AJ239321.1-201ENST00000424255 564 ntBASIC3.73□□□□□ -1.81
USF2Q15853 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.73□□□□□ -1.81
USF2Q15853 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.73□□□□□ -1.81
USF2Q15853 LYPLA1P1-201ENST00000434514 622 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AC004938.1-201ENST00000438468 308 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.73□□□□□ -1.81
USF2Q15853 CEACAMP4-201ENST00000457676 421 ntBASIC3.73□□□□□ -1.81
USF2Q15853 RPL23AP62-201ENST00000463396 453 ntBASIC3.73□□□□□ -1.81
USF2Q15853 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.73□□□□□ -1.81
USF2Q15853 AC006499.3-201ENST00000506077 748 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.73□□□□□ -1.81
USF2Q15853 MRPS33P2-201ENST00000507850 322 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AC004980.4-201ENST00000513375 203 ntBASIC3.73□□□□□ -1.81
USF2Q15853 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.73□□□□□ -1.81
USF2Q15853 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.73□□□□□ -1.81
USF2Q15853 RNU6-1004P-201ENST00000516584 111 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.73□□□□□ -1.81
USF2Q15853 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.73□□□□□ -1.81
USF2Q15853 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.73□□□□□ -1.81
USF2Q15853 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.73□□□□□ -1.81
USF2Q15853 HAUS8P1-201ENST00000549005 542 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.73□□□□□ -1.81
USF2Q15853 AL109741.3-201ENST00000561748 592 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.73□□□□□ -1.81
USF2Q15853 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.73□□□□□ -1.81
USF2Q15853 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.73□□□□□ -1.81
USF2Q15853 COX6CP4-201ENST00000605798 228 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AC113194.1-201ENST00000606037 500 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AC010424.2-201ENST00000607594 443 ntBASIC3.73□□□□□ -1.81
USF2Q15853 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.73□□□□□ -1.81
USF2Q15853 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.73□□□□□ -1.81
USF2Q15853 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.73□□□□□ -1.81
USF2Q15853 AC006453.5-201ENST00000636451 619 ntBASIC3.73□□□□□ -1.81
USF2Q15853 LINC01739-205ENST00000641890 573 ntBASIC3.73□□□□□ -1.81
USF2Q15853 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
USF2Q15853 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
USF2Q15853 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.73□□□□□ -1.81
USF2Q15853 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
USF2Q15853 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.73□□□□□ -1.81
USF2Q15853 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.73□□□□□ -1.81
USF2Q15853 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USF2Q15853 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USF2Q15853 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USF2Q15853 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USF2Q15853 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.72□□□□□ -1.81
USF2Q15853 RNU1-106P-201ENST00000384382 164 ntBASIC3.72□□□□□ -1.81
USF2Q15853 SNORA70-201ENST00000384436 135 ntBASIC3.72□□□□□ -1.81
USF2Q15853 HMGB1P10-201ENST00000395823 563 ntBASIC3.72□□□□□ -1.81
USF2Q15853 AC115285.1-201ENST00000424879 736 ntBASIC3.72□□□□□ -1.81
USF2Q15853 NPM1P34-201ENST00000428821 893 ntBASIC3.72□□□□□ -1.81
USF2Q15853 ACTR3P2-201ENST00000439585 1257 ntBASIC3.72□□□□□ -1.81
USF2Q15853 HMGN2P21-201ENST00000447764 270 ntBASIC3.72□□□□□ -1.81
USF2Q15853 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.72□□□□□ -1.81
USF2Q15853 PPIAP3-201ENST00000450588 505 ntBASIC3.72□□□□□ -1.81
USF2Q15853 HMGB1P26-201ENST00000452520 628 ntBASIC3.72□□□□□ -1.81
USF2Q15853 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.72□□□□□ -1.81
USF2Q15853 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.72□□□□□ -1.81
USF2Q15853 RPL23AP65-201ENST00000475608 468 ntBASIC3.72□□□□□ -1.81
USF2Q15853 AC078817.1-201ENST00000492623 435 ntBASIC3.72□□□□□ -1.81
USF2Q15853 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.72□□□□□ -1.81
USF2Q15853 AC021087.2-201ENST00000504656 1203 ntBASIC3.72□□□□□ -1.81
USF2Q15853 AC139783.2-201ENST00000504847 1145 ntBASIC3.72□□□□□ -1.81
USF2Q15853 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
USF2Q15853 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.72□□□□□ -1.81
USF2Q15853 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.72□□□□□ -1.81
USF2Q15853 AC010285.3-201ENST00000511668 676 ntBASIC3.72□□□□□ -1.81
USF2Q15853 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.72□□□□□ -1.81
USF2Q15853 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.72□□□□□ -1.81
USF2Q15853 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.72□□□□□ -1.81
USF2Q15853 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.72□□□□□ -1.81
USF2Q15853 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms