Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 AL391597.1-201ENST00000618707 694 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 AC140479.6-201ENST00000633535 357 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS1Q01581 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS1Q01581 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS1Q01581 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC139713.2-214ENST00000642059 1811 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 HSPD1P11-201ENST00000508643 1702 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS1Q01581 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS1Q01581 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS1Q01581 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 RNU4-7P-201ENST00000364758 141 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 RPS24P12-201ENST00000402084 394 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 RNA5SP36-201ENST00000410197 133 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC099336.2-201ENST00000422457 254 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 AL157831.1-201ENST00000426134 473 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 RPL23AP89-201ENST00000439324 255 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 Z95152.1-201ENST00000453556 656 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC099560.2-201ENST00000457554 255 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 RN7SL98P-201ENST00000462271 300 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 RN7SL585P-201ENST00000470538 280 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 RPS29P19-201ENST00000479709 171 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 MTND3P6-201ENST00000485242 339 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC013356.1-201ENST00000489027 564 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC025554.1-201ENST00000505641 188 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC068831.4-201ENST00000556118 109 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 AL356218.2-201ENST00000605264 187 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC090948.1-201ENST00000607464 549 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC015813.4-201ENST00000610469 179 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 AL035461.2-201ENST00000619201 524 ntBASIC4.07□□□□□ -1.76
HMGCS1Q01581 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS1Q01581 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS1Q01581 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS1Q01581 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS1Q01581 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS1Q01581 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS1Q01581 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGCS1Q01581 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS1Q01581 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS1Q01581 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS1Q01581 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS1Q01581 RNU6-984P-201ENST00000363236 109 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 RHOT1P2-201ENST00000366423 333 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 AL607077.1-201ENST00000401718 499 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 FAR2P2-201ENST00000413041 594 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 RFESDP1-201ENST00000422350 461 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 GTF2IP2-201ENST00000424290 697 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 FAR2P4-202ENST00000425399 584 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 HMGB1P32-201ENST00000425971 565 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 AL357520.1-201ENST00000441557 453 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 AL512326.1-201ENST00000443050 721 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 H2AFZP6-201ENST00000444403 394 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 EEF1A1P1-201ENST00000447052 739 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 RPL23AP81-201ENST00000455252 467 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 RPL7P32-201ENST00000457119 744 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 APOOP2-201ENST00000461561 539 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 CCDC75P1-201ENST00000469247 791 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 AC017037.1-201ENST00000508460 471 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 RNU6-551P-201ENST00000516661 103 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 AC010476.1-201ENST00000519111 851 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 RAB9BP1-201ENST00000519581 626 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 OR8X1P-201ENST00000534542 869 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 TRAV8-5-201ENST00000537369 341 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 AC090515.3-201ENST00000560431 315 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms