Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.82□□□□□ -1.48
RHBDL3P58872 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDL3P58872 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.82□□□□□ -1.48
RHBDL3P58872 AC138832.1-201ENST00000522871 556 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.82□□□□□ -1.48
RHBDL3P58872 AC022726.1-201ENST00000587475 207 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 AP003117.1-201ENST00000602771 554 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 AC112503.1-201ENST00000608436 391 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDL3P58872 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDL3P58872 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.82□□□□□ -1.48
RHBDL3P58872 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDL3P58872 AC091932.2-201ENST00000623014 291 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 AC139713.2-210ENST00000641741 992 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 AC008758.3-201ENST00000507003 1829 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RHBDL3P58872 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RHBDL3P58872 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RHBDL3P58872 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDL3P58872 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.82□□□□□ -1.48
RHBDL3P58872 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
RHBDL3P58872 SCARNA15-201ENST00000607520 4325 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDL3P58872 RNU6-925P-201ENST00000384629 104 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 TMSB4XP8-201ENST00000402089 135 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 AC016397.1-201ENST00000412463 242 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 TMSB4XP6-201ENST00000415187 135 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 QRSL1P2-201ENST00000418582 964 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 TMSB4XP1-201ENST00000424567 135 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.81□□□□□ -1.48
RHBDL3P58872 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.81□□□□□ -1.48
RHBDL3P58872 AC092447.2-201ENST00000435487 669 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDL3P58872 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDL3P58872 HMGB1P48-201ENST00000446155 598 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDL3P58872 RPS5P7-201ENST00000456664 608 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 AC091959.2-201ENST00000477363 321 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 NIFKP7-201ENST00000503365 834 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 ENPP7P11-201ENST00000505915 627 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 AC119751.4-201ENST00000507498 357 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 PGBD4P4-201ENST00000509673 613 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDL3P58872 RN7SKP82-201ENST00000516786 223 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDL3P58872 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.81□□□□□ -1.48
RHBDL3P58872 IGJP1-201ENST00000522682 475 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.81□□□□□ -1.48
RHBDL3P58872 AC074029.1-201ENST00000552531 1044 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 AL049839.1-201ENST00000556151 657 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 HNRNPCP4-201ENST00000571636 900 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 RN7SL802P-201ENST00000577858 299 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 AC019206.1-201ENST00000621938 425 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 BMS1P21-201ENST00000634565 365 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDL3P58872 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RHBDL3P58872 XPOTP1-201ENST00000443317 2398 ntBASIC5.81□□□□□ -1.48
RHBDL3P58872 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDL3P58872 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDL3P58872 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDL3P58872 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RHBDL3P58872 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AC025263.3-201ENST00000622965 1396 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDL3P58872 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AL450345.1-202ENST00000605741 3881 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.8□□□□□ -1.48
RHBDL3P58872 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDL3P58872 AL049555.1-201ENST00000562834 1933 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDL3P58872 SNORA73.1-201ENST00000363107 205 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 RNA5SP332-201ENST00000391063 115 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AC069213.2-201ENST00000420238 366 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 RPL30P3-201ENST00000424262 333 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 IPMKP1-201ENST00000425988 855 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDL3P58872 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDL3P58872 AC073052.1-201ENST00000440417 714 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDL3P58872 AC233982.1-201ENST00000451247 436 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.8□□□□□ -1.48
RHBDL3P58872 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AC093720.1-201ENST00000505681 714 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.8□□□□□ -1.48
RHBDL3P58872 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.8□□□□□ -1.48
RHBDL3P58872 NPM1P6-201ENST00000521088 871 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 AC100784.1-201ENST00000522790 310 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.8□□□□□ -1.48
RHBDL3P58872 AC133552.5-201ENST00000604266 540 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 AC093673.2-201ENST00000609674 331 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 FAM27B-201ENST00000610601 213 ntBASIC5.8□□□□□ -1.48
RHBDL3P58872 VN1R74P-201ENST00000613259 503 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms