Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH4P55283 PSMC1P13-201ENST00000458195 985 ntBASIC4.46□□□□□ -1.7
CDH4P55283 APOOP2-201ENST00000461561 539 ntBASIC4.46□□□□□ -1.7
CDH4P55283 RPS20P4-201ENST00000461659 355 ntBASIC4.46□□□□□ -1.7
CDH4P55283 METTL15P1-201ENST00000481421 1045 ntBASIC4.46□□□□□ -1.7
CDH4P55283 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH4P55283 AC106806.2-201ENST00000509365 500 ntBASIC4.46□□□□□ -1.7
CDH4P55283 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH4P55283 TRAV8-5-201ENST00000537369 341 ntBASIC4.46□□□□□ -1.7
CDH4P55283 AL352979.3-201ENST00000553515 247 ntBASIC4.46□□□□□ -1.7
CDH4P55283 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH4P55283 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH4P55283 MLECP1-201ENST00000615893 709 ntBASIC4.46□□□□□ -1.7
CDH4P55283 MIR6758-201ENST00000620653 63 ntBASIC4.46□□□□□ -1.7
CDH4P55283 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH4P55283 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH4P55283 OR51C1P-202ENST00000641159 1444 ntBASIC4.46□□□□□ -1.7
CDH4P55283 AC092079.1-201ENST00000558620 1985 ntBASIC4.45□□□□□ -1.7
CDH4P55283 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH4P55283 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDH4P55283 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH4P55283 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH4P55283 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH4P55283 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH4P55283 RPL32P3-201ENST00000359025 275 ntBASIC4.45□□□□□ -1.7
CDH4P55283 RNU1-20P-201ENST00000363314 162 ntBASIC4.45□□□□□ -1.7
CDH4P55283 RNA5SP366-201ENST00000365454 123 ntBASIC4.45□□□□□ -1.7
CDH4P55283 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDH4P55283 AL139039.2-201ENST00000407436 479 ntBASIC4.45□□□□□ -1.7
CDH4P55283 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.45□□□□□ -1.7
CDH4P55283 COX6CP17-201ENST00000421389 185 ntBASIC4.45□□□□□ -1.7
CDH4P55283 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH4P55283 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH4P55283 EIF2S2P4-201ENST00000461070 984 ntBASIC4.45□□□□□ -1.7
CDH4P55283 AC109327.1-201ENST00000471666 403 ntBASIC4.45□□□□□ -1.7
CDH4P55283 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
CDH4P55283 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH4P55283 RPL35P6-201ENST00000490024 372 ntBASIC4.45□□□□□ -1.7
CDH4P55283 AC026979.1-201ENST00000492525 396 ntBASIC4.45□□□□□ -1.7
CDH4P55283 HMGB3P13-201ENST00000511263 607 ntBASIC4.45□□□□□ -1.7
CDH4P55283 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH4P55283 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.45□□□□□ -1.7
CDH4P55283 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.45□□□□□ -1.7
CDH4P55283 OR4V1P-201ENST00000525394 1140 ntBASIC4.45□□□□□ -1.7
CDH4P55283 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH4P55283 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH4P55283 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.45□□□□□ -1.7
CDH4P55283 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.45□□□□□ -1.7
CDH4P55283 AP003497.2-201ENST00000624220 967 ntBASIC4.45□□□□□ -1.7
CDH4P55283 AP000843.1-201ENST00000624880 701 ntBASIC4.45□□□□□ -1.7
CDH4P55283 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH4P55283 AL139254.3-201ENST00000641097 674 ntBASIC4.45□□□□□ -1.7
CDH4P55283 AL158163.1-201ENST00000603915 1649 ntBASIC4.45□□□□□ -1.7
CDH4P55283 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH4P55283 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH4P55283 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CDH4P55283 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH4P55283 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH4P55283 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH4P55283 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH4P55283 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH4P55283 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH4P55283 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
CDH4P55283 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CDH4P55283 FAM3C2-201ENST00000312214 681 ntBASIC4.44□□□□□ -1.7
CDH4P55283 RNU1-132P-201ENST00000364300 164 ntBASIC4.44□□□□□ -1.7
CDH4P55283 MIR708-201ENST00000390708 88 ntBASIC4.44□□□□□ -1.7
CDH4P55283 OR6C69P-201ENST00000394268 893 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AL607077.1-201ENST00000401718 499 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AL121834.1-202ENST00000404494 277 ntBASIC4.44□□□□□ -1.7
CDH4P55283 MIR1911-201ENST00000410783 80 ntBASIC4.44□□□□□ -1.7
CDH4P55283 RNU6-564P-201ENST00000410983 104 ntBASIC4.44□□□□□ -1.7
CDH4P55283 RN7SKP167-201ENST00000411047 285 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH4P55283 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AC048351.1-201ENST00000420064 602 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH4P55283 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH4P55283 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH4P55283 CEACAMP1-201ENST00000434624 1035 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AL353597.2-202ENST00000434901 373 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH4P55283 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.44□□□□□ -1.7
CDH4P55283 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.44□□□□□ -1.7
CDH4P55283 TPT1P12-201ENST00000448968 492 ntBASIC4.44□□□□□ -1.7
CDH4P55283 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.44□□□□□ -1.7
CDH4P55283 RN7SL41P-201ENST00000476144 297 ntBASIC4.44□□□□□ -1.7
CDH4P55283 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH4P55283 AC083829.1-201ENST00000503756 657 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH4P55283 TCP11X3P-202ENST00000514289 1254 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AC134698.5-201ENST00000519444 336 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.44□□□□□ -1.7
CDH4P55283 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH4P55283 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH4P55283 AC092868.3-201ENST00000560515 784 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AC018552.3-201ENST00000567416 561 ntBASIC4.44□□□□□ -1.7
CDH4P55283 MIR3138-201ENST00000585238 82 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AC068020.1-201ENST00000594215 661 ntBASIC4.44□□□□□ -1.7
CDH4P55283 AC005034.4-201ENST00000603612 899 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms