Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.95□□□□□ -1.62
SCN4AP35499 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.95□□□□□ -1.62
SCN4AP35499 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCN4AP35499 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.95□□□□□ -1.62
SCN4AP35499 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.95□□□□□ -1.62
SCN4AP35499 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SCN4AP35499 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SCN4AP35499 AC093849.1-201ENST00000563631 2209 ntBASIC4.95□□□□□ -1.62
SCN4AP35499 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCN4AP35499 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCN4AP35499 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SCN4AP35499 SETP15-201ENST00000412724 337 ntBASIC4.95□□□□□ -1.62
SCN4AP35499 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.95□□□□□ -1.62
SCN4AP35499 MRPL48P1-201ENST00000445390 636 ntBASIC4.95□□□□□ -1.62
SCN4AP35499 RPS11P1-201ENST00000451072 473 ntBASIC4.95□□□□□ -1.62
SCN4AP35499 DUX4L52-201ENST00000549363 777 ntBASIC4.95□□□□□ -1.62
SCN4AP35499 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
SCN4AP35499 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4AP35499 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
SCN4AP35499 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SCN4AP35499 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4AP35499 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SCN4AP35499 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SCN4AP35499 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
SCN4AP35499 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
SCN4AP35499 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4AP35499 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SCN4AP35499 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4AP35499 OR56B2P-201ENST00000317102 954 ntBASIC4.94□□□□□ -1.62
SCN4AP35499 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4AP35499 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4AP35499 RPL7P4-203ENST00000430239 730 ntBASIC4.94□□□□□ -1.62
SCN4AP35499 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.94□□□□□ -1.62
SCN4AP35499 OR9M1P-201ENST00000459641 921 ntBASIC4.94□□□□□ -1.62
SCN4AP35499 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN4AP35499 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.94□□□□□ -1.62
SCN4AP35499 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.94□□□□□ -1.62
SCN4AP35499 SNORD91B-202ENST00000608459 222 ntBASIC4.94□□□□□ -1.62
SCN4AP35499 AP001002.2-201ENST00000625137 386 ntBASIC4.94□□□□□ -1.62
SCN4AP35499 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4AP35499 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4AP35499 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SCN4AP35499 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4AP35499 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4AP35499 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN4AP35499 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4AP35499 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SCN4AP35499 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN4AP35499 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4AP35499 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4AP35499 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4AP35499 RPL7P1-201ENST00000468161 747 ntBASIC4.93□□□□□ -1.62
SCN4AP35499 RPL7P9-201ENST00000468715 747 ntBASIC4.93□□□□□ -1.62
SCN4AP35499 RPS29P19-201ENST00000479709 171 ntBASIC4.93□□□□□ -1.62
SCN4AP35499 RN7SL323P-201ENST00000494712 295 ntBASIC4.93□□□□□ -1.62
SCN4AP35499 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN4AP35499 AC027455.1-201ENST00000574104 594 ntBASIC4.93□□□□□ -1.62
SCN4AP35499 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4AP35499 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4AP35499 MIR7975-201ENST00000619350 68 ntBASIC4.93□□□□□ -1.62
SCN4AP35499 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SCN4AP35499 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SCN4AP35499 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SCN4AP35499 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4AP35499 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN4AP35499 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4AP35499 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN4AP35499 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4AP35499 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4AP35499 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4AP35499 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.93□□□□□ -1.62
SCN4AP35499 AC006011.1-201ENST00000442758 349 ntBASIC4.93□□□□□ -1.62
SCN4AP35499 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4AP35499 PPIAP3-201ENST00000450588 505 ntBASIC4.93□□□□□ -1.62
SCN4AP35499 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN4AP35499 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN4AP35499 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4AP35499 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4AP35499 AC022655.2-201ENST00000577280 318 ntBASIC4.93□□□□□ -1.62
SCN4AP35499 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN4AP35499 AC005520.3-201ENST00000602874 370 ntBASIC4.93□□□□□ -1.62
SCN4AP35499 AL353600.1-201ENST00000608148 251 ntBASIC4.93□□□□□ -1.62
SCN4AP35499 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SCN4AP35499 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN4AP35499 ERCC6-202ENST00000374127 1782 ntBASIC4.92□□□□□ -1.62
SCN4AP35499 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN4AP35499 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN4AP35499 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SCN4AP35499 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SCN4AP35499 MIR30B-201ENST00000384850 88 ntBASIC4.92□□□□□ -1.62
SCN4AP35499 AL080315.1-201ENST00000406055 466 ntBASIC4.92□□□□□ -1.62
SCN4AP35499 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.92□□□□□ -1.62
SCN4AP35499 NMNAT1P2-201ENST00000435192 860 ntBASIC4.92□□□□□ -1.62
SCN4AP35499 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN4AP35499 FCF1P7-201ENST00000451185 558 ntBASIC4.92□□□□□ -1.62
SCN4AP35499 AC104849.1-201ENST00000462623 405 ntBASIC4.92□□□□□ -1.62
SCN4AP35499 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN4AP35499 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN4AP35499 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN4AP35499 HMGN1P15-201ENST00000513870 295 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms