Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 SNORA3C-201ENST00000408792 125 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.63□□□□□ -1.67
CASQ1P31415 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.63□□□□□ -1.67
CASQ1P31415 RCC2P2-201ENST00000422174 918 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 AC007559.1-201ENST00000428736 355 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 AC016831.4-201ENST00000438302 307 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 RPL23AP89-201ENST00000439324 255 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 TPTE2P3-201ENST00000441562 1189 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.63□□□□□ -1.67
CASQ1P31415 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.63□□□□□ -1.67
CASQ1P31415 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.63□□□□□ -1.67
CASQ1P31415 snoU13.20-201ENST00000459180 104 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.63□□□□□ -1.67
CASQ1P31415 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.63□□□□□ -1.67
CASQ1P31415 AC013701.1-201ENST00000522657 465 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CASQ1P31415 AGGF1P8-201ENST00000562979 1000 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.63□□□□□ -1.67
CASQ1P31415 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.63□□□□□ -1.67
CASQ1P31415 AC093765.1-201ENST00000603758 881 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 AC244100.4-201ENST00000617747 388 ntBASIC4.63□□□□□ -1.67
CASQ1P31415 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.63□□□□□ -1.67
CASQ1P31415 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CASQ1P31415 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CASQ1P31415 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CASQ1P31415 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CASQ1P31415 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CASQ1P31415 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CASQ1P31415 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CASQ1P31415 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.63□□□□□ -1.67
CASQ1P31415 PABPC1P6-201ENST00000445594 1829 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CASQ1P31415 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.62□□□□□ -1.67
CASQ1P31415 MAPK10-263ENST00000641052 4307 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CASQ1P31415 RNA5SP191-201ENST00000362585 102 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CASQ1P31415 RPL23AP26-201ENST00000412728 464 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 AC114814.2-201ENST00000419195 485 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 PTP4A1P5-201ENST00000420305 455 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 AC006065.1-201ENST00000422539 802 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CASQ1P31415 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.62□□□□□ -1.67
CASQ1P31415 RPS26P40-201ENST00000435209 294 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 MTCYBP29-201ENST00000436327 1006 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.62□□□□□ -1.67
CASQ1P31415 AP000873.1-201ENST00000463987 400 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 RPL9P32-201ENST00000464118 620 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 RPL7P22-201ENST00000466005 733 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.62□□□□□ -1.67
CASQ1P31415 RN7SL30P-201ENST00000488416 306 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.62□□□□□ -1.67
CASQ1P31415 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.62□□□□□ -1.67
CASQ1P31415 RN7SKP70-201ENST00000516655 271 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.62□□□□□ -1.67
CASQ1P31415 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.62□□□□□ -1.67
CASQ1P31415 AC027176.2-201ENST00000559166 746 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CASQ1P31415 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CASQ1P31415 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.62□□□□□ -1.67
CASQ1P31415 AC073091.2-201ENST00000603205 907 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 AC087763.1-201ENST00000603391 286 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 AC064801.1-201ENST00000612025 407 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 AC009163.6-201ENST00000612367 342 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 RN7SL722P-201ENST00000617780 284 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 RN7SL565P-201ENST00000618246 284 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 AL133370.2-201ENST00000619934 439 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 AC091905.4-201ENST00000623432 202 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CASQ1P31415 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CASQ1P31415 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.62□□□□□ -1.67
CASQ1P31415 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CASQ1P31415 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CASQ1P31415 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CASQ1P31415 NOL8P1-201ENST00000508336 3529 ntBASIC4.62□□□□□ -1.67
CASQ1P31415 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CASQ1P31415 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CASQ1P31415 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.61□□□□□ -1.67
CASQ1P31415 FAM3C2-201ENST00000312214 681 ntBASIC4.61□□□□□ -1.67
CASQ1P31415 RNU1-106P-201ENST00000384382 164 ntBASIC4.61□□□□□ -1.67
CASQ1P31415 AP000357.1-201ENST00000409926 1165 ntBASIC4.61□□□□□ -1.67
CASQ1P31415 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CASQ1P31415 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.61□□□□□ -1.67
CASQ1P31415 NFYAP1-201ENST00000431953 972 ntBASIC4.61□□□□□ -1.67
CASQ1P31415 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.61□□□□□ -1.67
CASQ1P31415 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.61□□□□□ -1.67
CASQ1P31415 CEACAMP1-201ENST00000434624 1035 ntBASIC4.61□□□□□ -1.67
CASQ1P31415 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.61□□□□□ -1.67
CASQ1P31415 CNOT7P2-201ENST00000441051 832 ntBASIC4.61□□□□□ -1.67
CASQ1P31415 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.61□□□□□ -1.67
CASQ1P31415 HMGN2P7-201ENST00000456186 273 ntBASIC4.61□□□□□ -1.67
CASQ1P31415 AC109462.1-201ENST00000491087 368 ntBASIC4.61□□□□□ -1.67
CASQ1P31415 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.61□□□□□ -1.67
CASQ1P31415 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.61□□□□□ -1.67
CASQ1P31415 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.61□□□□□ -1.67
CASQ1P31415 HIGD1AP14-201ENST00000507617 282 ntBASIC4.61□□□□□ -1.67
CASQ1P31415 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.61□□□□□ -1.67
CASQ1P31415 ATP1B1P1-201ENST00000509767 915 ntBASIC4.61□□□□□ -1.67
CASQ1P31415 USP9YP5-201ENST00000511770 630 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms