Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC8P31273 PSMB7P1-201ENST00000556349 514 ntBASIC5□□□□□ -1.61
HOXC8P31273 MIR548Y-201ENST00000582739 110 ntBASIC5□□□□□ -1.61
HOXC8P31273 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5□□□□□ -1.61
HOXC8P31273 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5□□□□□ -1.61
HOXC8P31273 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
HOXC8P31273 AC135178.6-201ENST00000605314 398 ntBASIC5□□□□□ -1.61
HOXC8P31273 AL450270.1-201ENST00000606160 391 ntBASIC5□□□□□ -1.61
HOXC8P31273 AL139022.2-201ENST00000606934 443 ntBASIC5□□□□□ -1.61
HOXC8P31273 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5□□□□□ -1.61
HOXC8P31273 AC116447.1-201ENST00000613153 453 ntBASIC5□□□□□ -1.61
HOXC8P31273 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5□□□□□ -1.61
HOXC8P31273 AC139769.3-201ENST00000618383 175 ntBASIC5□□□□□ -1.61
HOXC8P31273 AC015804.1-201ENST00000622935 435 ntBASIC5□□□□□ -1.61
HOXC8P31273 AP001002.2-201ENST00000625137 386 ntBASIC5□□□□□ -1.61
HOXC8P31273 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC8P31273 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5□□□□□ -1.61
HOXC8P31273 AC100778.3-201ENST00000580060 1750 ntBASIC5□□□□□ -1.61
HOXC8P31273 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC8P31273 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5□□□□□ -1.61
HOXC8P31273 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC8P31273 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC8P31273 DDX18P4-201ENST00000511690 1966 ntBASIC5□□□□□ -1.61
HOXC8P31273 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC8P31273 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC8P31273 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC8P31273 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5□□□□□ -1.61
HOXC8P31273 AC009229.4-201ENST00000623854 1947 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXC8P31273 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC8P31273 CASC19-206ENST00000641028 1430 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 AC090017.1-201ENST00000548612 1779 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC8P31273 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXC8P31273 ZNF90P1-201ENST00000480493 1951 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC8P31273 SNORA70C-201ENST00000384538 135 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 TATDN1P1-201ENST00000414123 891 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC8P31273 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.99□□□□□ -1.61
HOXC8P31273 FO393419.3-201ENST00000428741 282 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 RPS27AP12-201ENST00000429552 465 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.99□□□□□ -1.61
HOXC8P31273 UBE2V1P6-201ENST00000430840 422 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 ELOCP10-201ENST00000440624 327 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 RPL7L1P1-201ENST00000448259 785 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC8P31273 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXC8P31273 AC090686.1-201ENST00000481577 749 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC8P31273 AC041039.1-201ENST00000485656 536 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 NPM1P6-201ENST00000521088 871 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 AP003730.1-201ENST00000524605 285 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC8P31273 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXC8P31273 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC8P31273 AC007224.1-201ENST00000564410 144 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 AC023762.1-201ENST00000603280 584 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 AC011458.1-201ENST00000604034 617 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 ELOCP34-201ENST00000604436 327 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 AC084824.5-201ENST00000612009 413 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 MIR1264-201ENST00000616374 69 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 AC090617.9-201ENST00000623751 147 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HOXC8P31273 AC096656.1-201ENST00000623826 1364 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HOXC8P31273 TCP1P3-201ENST00000414406 1498 ntBASIC4.99□□□□□ -1.61
HOXC8P31273 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC8P31273 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HOXC8P31273 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC8P31273 AL592494.2-201ENST00000425455 1548 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC8P31273 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC8P31273 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC8P31273 AC008033.1-201ENST00000216407 1162 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC8P31273 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HOXC8P31273 RNA5SP28-201ENST00000363841 119 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HOXC8P31273 UBBP2-201ENST00000376781 231 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 RNU4-74P-201ENST00000411280 161 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 AC011933.1-201ENST00000413334 321 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC8P31273 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC8P31273 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC8P31273 AL158053.1-201ENST00000441503 453 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 MRPL48P1-201ENST00000445390 636 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC8P31273 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC8P31273 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC8P31273 RPL7P32-201ENST00000457119 744 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 AC116533.1-201ENST00000459748 321 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC8P31273 AC104629.1-201ENST00000494226 508 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 AC111193.1-201ENST00000504097 155 ntBASIC4.98□□□□□ -1.61
HOXC8P31273 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC8P31273 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HOXC8P31273 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms