Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL121890.2-201ENST00000617644 465 ntBASIC4.76□□□□□ -1.65
COL4A5P29400 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A5P29400 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.75□□□□□ -1.65
COL4A5P29400 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A5P29400 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A5P29400 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A5P29400 AC023632.6-201ENST00000624338 2177 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A5P29400 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
COL4A5P29400 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A5P29400 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A5P29400 MTND5P1-201ENST00000445440 1375 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 SNORD35B-201ENST00000363660 87 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A5P29400 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A5P29400 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.75□□□□□ -1.65
COL4A5P29400 BX510359.1-201ENST00000456973 237 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 AC005726.1-201ENST00000494679 427 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.75□□□□□ -1.65
COL4A5P29400 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.75□□□□□ -1.65
COL4A5P29400 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A5P29400 PHBP17-201ENST00000528576 541 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.75□□□□□ -1.65
COL4A5P29400 CYCSP28-201ENST00000534284 321 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.75□□□□□ -1.65
COL4A5P29400 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.75□□□□□ -1.65
COL4A5P29400 AC124068.1-201ENST00000563131 678 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 AC107993.1-201ENST00000591343 684 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 AL451044.1-201ENST00000604867 238 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.75□□□□□ -1.65
COL4A5P29400 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.75□□□□□ -1.65
COL4A5P29400 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.75□□□□□ -1.65
COL4A5P29400 AC119674.1-207ENST00000641355 633 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 AC000374.1-201ENST00000434698 1745 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
COL4A5P29400 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC4.75□□□□□ -1.65
COL4A5P29400 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC4.75□□□□□ -1.65
COL4A5P29400 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.75□□□□□ -1.65
COL4A5P29400 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
COL4A5P29400 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A5P29400 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A5P29400 BOLA3P4-201ENST00000418151 400 ntBASIC4.74□□□□□ -1.65
COL4A5P29400 AL035423.1-201ENST00000420331 213 ntBASIC4.74□□□□□ -1.65
COL4A5P29400 UBDP1-202ENST00000457888 382 ntBASIC4.74□□□□□ -1.65
COL4A5P29400 AC112206.1-201ENST00000468416 477 ntBASIC4.74□□□□□ -1.65
COL4A5P29400 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.74□□□□□ -1.65
COL4A5P29400 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.74□□□□□ -1.65
COL4A5P29400 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.74□□□□□ -1.65
COL4A5P29400 GMPSP1-201ENST00000514075 579 ntBASIC4.74□□□□□ -1.65
COL4A5P29400 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.74□□□□□ -1.65
COL4A5P29400 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.74□□□□□ -1.65
COL4A5P29400 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A5P29400 NPM1P47-201ENST00000560843 856 ntBASIC4.74□□□□□ -1.65
COL4A5P29400 AC007599.1-201ENST00000568688 1174 ntBASIC4.74□□□□□ -1.65
COL4A5P29400 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.74□□□□□ -1.65
COL4A5P29400 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A5P29400 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.74□□□□□ -1.65
COL4A5P29400 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
COL4A5P29400 ZNF402P-201ENST00000404435 3100 ntBASIC4.74□□□□□ -1.65
COL4A5P29400 AC004656.1-201ENST00000568479 4951 ntBASIC4.74□□□□□ -1.65
COL4A5P29400 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.74□□□□□ -1.65
COL4A5P29400 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.74□□□□□ -1.65
COL4A5P29400 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A5P29400 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
COL4A5P29400 RNA5SP97-201ENST00000365006 84 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
COL4A5P29400 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A5P29400 PGBD4P8-201ENST00000412993 562 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 PRELID3BP10-201ENST00000431957 584 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 RAD23BP3-201ENST00000454157 1152 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A5P29400 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A5P29400 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A5P29400 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A5P29400 AC012417.1-201ENST00000582307 1039 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 ELOCP35-201ENST00000604289 336 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 AL031658.2-201ENST00000616850 651 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A5P29400 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A5P29400 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A5P29400 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A5P29400 THAP12P5-201ENST00000405864 2275 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.73□□□□□ -1.65
COL4A5P29400 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
COL4A5P29400 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A5P29400 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A5P29400 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A5P29400 FABP3P2-201ENST00000453169 399 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A5P29400 AC022968.1-201ENST00000567372 442 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.73□□□□□ -1.65
COL4A5P29400 MIR5187-201ENST00000583479 76 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 AC243654.2-201ENST00000612843 443 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.73□□□□□ -1.65
COL4A5P29400 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A5P29400 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
COL4A5P29400 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A5P29400 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL4A5P29400 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL4A5P29400 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms