Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MIR195-201ENST00000385194 87 ntBASIC4.53□□□□□ -1.68
RETP07949 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RETP07949 RPL23AP48-201ENST00000406913 488 ntBASIC4.53□□□□□ -1.68
RETP07949 RAB9AP4-201ENST00000415230 609 ntBASIC4.53□□□□□ -1.68
RETP07949 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.53□□□□□ -1.68
RETP07949 YY1P1-201ENST00000427625 668 ntBASIC4.53□□□□□ -1.68
RETP07949 AC243772.1-201ENST00000451620 410 ntBASIC4.53□□□□□ -1.68
RETP07949 AC005008.1-201ENST00000456151 612 ntBASIC4.53□□□□□ -1.68
RETP07949 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.53□□□□□ -1.68
RETP07949 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.53□□□□□ -1.68
RETP07949 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.53□□□□□ -1.68
RETP07949 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.53□□□□□ -1.68
RETP07949 SNORD39.2-201ENST00000579995 76 ntBASIC4.53□□□□□ -1.68
RETP07949 MIR4286-201ENST00000580651 93 ntBASIC4.53□□□□□ -1.68
RETP07949 AC008739.3-201ENST00000603262 127 ntBASIC4.53□□□□□ -1.68
RETP07949 AC112484.5-201ENST00000624189 228 ntBASIC4.53□□□□□ -1.68
RETP07949 AC011815.3-201ENST00000624194 473 ntBASIC4.53□□□□□ -1.68
RETP07949 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.53□□□□□ -1.68
RETP07949 MIR6715B-201ENST00000637172 77 ntBASIC4.53□□□□□ -1.68
RETP07949 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.53□□□□□ -1.68
RETP07949 PNPT1P2-201ENST00000456768 2050 ntBASIC4.53□□□□□ -1.68
RETP07949 AL121950.1-201ENST00000624993 2077 ntBASIC4.53□□□□□ -1.68
RETP07949 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.53□□□□□ -1.68
RETP07949 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.53□□□□□ -1.68
RETP07949 AC092435.4-201ENST00000623012 4159 ntBASIC4.53□□□□□ -1.68
RETP07949 MAPK10-303ENST00000641324 3959 ntBASIC4.53□□□□□ -1.68
RETP07949 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RETP07949 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RETP07949 Z73965.1-201ENST00000623412 2297 ntBASIC4.52□□□□□ -1.69
RETP07949 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.52□□□□□ -1.69
RETP07949 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RETP07949 KPNA2P2-201ENST00000419546 1489 ntBASIC4.52□□□□□ -1.69
RETP07949 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RETP07949 SNORD46.1-201ENST00000364139 104 ntBASIC4.52□□□□□ -1.69
RETP07949 Y_RNA.333-201ENST00000365274 102 ntBASIC4.52□□□□□ -1.69
RETP07949 RNA5SP283-201ENST00000365604 119 ntBASIC4.52□□□□□ -1.69
RETP07949 AC093719.1-202ENST00000392735 373 ntBASIC4.52□□□□□ -1.69
RETP07949 ARL4AP5-201ENST00000404372 599 ntBASIC4.52□□□□□ -1.69
RETP07949 AL080315.1-201ENST00000406055 466 ntBASIC4.52□□□□□ -1.69
RETP07949 RN7SKP159-201ENST00000410657 292 ntBASIC4.52□□□□□ -1.69
RETP07949 OR51B3P-201ENST00000412287 913 ntBASIC4.52□□□□□ -1.69
RETP07949 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.52□□□□□ -1.69
RETP07949 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.52□□□□□ -1.69
RETP07949 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.52□□□□□ -1.69
RETP07949 RPL23AP65-201ENST00000475608 468 ntBASIC4.52□□□□□ -1.69
RETP07949 AC091959.2-201ENST00000477363 321 ntBASIC4.52□□□□□ -1.69
RETP07949 TRBV8-1-201ENST00000481590 279 ntBASIC4.52□□□□□ -1.69
RETP07949 AC041039.1-201ENST00000485656 536 ntBASIC4.52□□□□□ -1.69
RETP07949 PRELID3BP7-201ENST00000503606 469 ntBASIC4.52□□□□□ -1.69
RETP07949 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.52□□□□□ -1.69
RETP07949 AC108475.1-201ENST00000507880 950 ntBASIC4.52□□□□□ -1.69
RETP07949 VWA8P1-201ENST00000510889 176 ntBASIC4.52□□□□□ -1.69
RETP07949 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.52□□□□□ -1.69
RETP07949 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.52□□□□□ -1.69
RETP07949 AP000889.1-201ENST00000530968 660 ntBASIC4.52□□□□□ -1.69
RETP07949 CYCSP28-201ENST00000534284 321 ntBASIC4.52□□□□□ -1.69
RETP07949 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RETP07949 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.52□□□□□ -1.69
RETP07949 AP001160.4-201ENST00000596971 382 ntBASIC4.52□□□□□ -1.69
RETP07949 AC005520.3-201ENST00000602874 370 ntBASIC4.52□□□□□ -1.69
RETP07949 AC130352.1-201ENST00000602979 661 ntBASIC4.52□□□□□ -1.69
RETP07949 AC026368.1-201ENST00000614934 690 ntBASIC4.52□□□□□ -1.69
RETP07949 AC009237.17-201ENST00000618111 748 ntBASIC4.52□□□□□ -1.69
RETP07949 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.52□□□□□ -1.69
RETP07949 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.52□□□□□ -1.69
RETP07949 AL139254.3-201ENST00000641097 674 ntBASIC4.52□□□□□ -1.69
RETP07949 LINC01808-202ENST00000641680 1116 ntBASIC4.52□□□□□ -1.69
RETP07949 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.52□□□□□ -1.69
RETP07949 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RETP07949 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
RETP07949 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.52□□□□□ -1.69
RETP07949 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.52□□□□□ -1.69
RETP07949 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.51□□□□□ -1.69
RETP07949 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RETP07949 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RETP07949 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 AC011155.1-201ENST00000316512 456 ntBASIC4.51□□□□□ -1.69
RETP07949 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 MIR372-201ENST00000362225 67 ntBASIC4.51□□□□□ -1.69
RETP07949 RNU1-20P-201ENST00000363314 162 ntBASIC4.51□□□□□ -1.69
RETP07949 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 MT-RNR1-201ENST00000389680 954 ntBASIC4.51□□□□□ -1.69
RETP07949 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.51□□□□□ -1.69
RETP07949 AL035696.2-201ENST00000407941 709 ntBASIC4.51□□□□□ -1.69
RETP07949 RPL7P2-201ENST00000427639 268 ntBASIC4.51□□□□□ -1.69
RETP07949 BTG3P1-201ENST00000435859 716 ntBASIC4.51□□□□□ -1.69
RETP07949 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RETP07949 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
RETP07949 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
RETP07949 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.51□□□□□ -1.69
RETP07949 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.51□□□□□ -1.69
RETP07949 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RETP07949 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.51□□□□□ -1.69
RETP07949 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
RETP07949 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.51□□□□□ -1.69
RETP07949 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms