Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.06□□□□□ -1.6
RB1P06400 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.06□□□□□ -1.6
RB1P06400 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RB1P06400 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.05□□□□□ -1.6
RB1P06400 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 SNORD56.4-201ENST00000363883 71 ntBASIC5.05□□□□□ -1.6
RB1P06400 RNU1-85P-201ENST00000364127 164 ntBASIC5.05□□□□□ -1.6
RB1P06400 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RB1P06400 SNORA70C-201ENST00000384538 135 ntBASIC5.05□□□□□ -1.6
RB1P06400 SNORA48.7-201ENST00000391302 135 ntBASIC5.05□□□□□ -1.6
RB1P06400 ATF1P1-201ENST00000406040 927 ntBASIC5.05□□□□□ -1.6
RB1P06400 U3.32-201ENST00000408116 212 ntBASIC5.05□□□□□ -1.6
RB1P06400 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.05□□□□□ -1.6
RB1P06400 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.05□□□□□ -1.6
RB1P06400 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 QRSL1P2-201ENST00000418582 964 ntBASIC5.05□□□□□ -1.6
RB1P06400 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.05□□□□□ -1.6
RB1P06400 CBX1P1-201ENST00000440184 427 ntBASIC5.05□□□□□ -1.6
RB1P06400 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RB1P06400 AL353093.1-201ENST00000441292 436 ntBASIC5.05□□□□□ -1.6
RB1P06400 FHP1-201ENST00000442741 703 ntBASIC5.05□□□□□ -1.6
RB1P06400 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.05□□□□□ -1.6
RB1P06400 RPL7P32-201ENST00000457119 744 ntBASIC5.05□□□□□ -1.6
RB1P06400 RN7SL303P-201ENST00000469773 251 ntBASIC5.05□□□□□ -1.6
RB1P06400 MTND4LP2-201ENST00000502312 285 ntBASIC5.05□□□□□ -1.6
RB1P06400 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RB1P06400 ENPP7P11-201ENST00000505915 627 ntBASIC5.05□□□□□ -1.6
RB1P06400 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RB1P06400 AC026402.1-201ENST00000513642 170 ntBASIC5.05□□□□□ -1.6
RB1P06400 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.05□□□□□ -1.6
RB1P06400 AC100784.1-201ENST00000522790 310 ntBASIC5.05□□□□□ -1.6
RB1P06400 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.05□□□□□ -1.6
RB1P06400 AC107918.3-201ENST00000533272 382 ntBASIC5.05□□□□□ -1.6
RB1P06400 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.05□□□□□ -1.6
RB1P06400 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.05□□□□□ -1.6
RB1P06400 AC124283.4-201ENST00000581815 456 ntBASIC5.05□□□□□ -1.6
RB1P06400 BNIP3P33-201ENST00000598912 569 ntBASIC5.05□□□□□ -1.6
RB1P06400 AC090948.1-201ENST00000607464 549 ntBASIC5.05□□□□□ -1.6
RB1P06400 AC245100.7-201ENST00000609678 442 ntBASIC5.05□□□□□ -1.6
RB1P06400 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RB1P06400 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RB1P06400 AC011755.1-201ENST00000623763 2049 ntBASIC5.05□□□□□ -1.6
RB1P06400 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RB1P06400 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RB1P06400 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RB1P06400 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RB1P06400 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RB1P06400 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 AC006971.1-201ENST00000407916 4486 ntBASIC5.05□□□□□ -1.6
RB1P06400 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
RB1P06400 OR14L1P-202ENST00000641545 3009 ntBASIC5.05□□□□□ -1.6
RB1P06400 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RB1P06400 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RB1P06400 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RB1P06400 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RB1P06400 AC092079.1-201ENST00000558620 1985 ntBASIC5.04□□□□□ -1.6
RB1P06400 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
RB1P06400 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.04□□□□□ -1.6
RB1P06400 HSPD1P11-201ENST00000508643 1702 ntBASIC5.04□□□□□ -1.6
RB1P06400 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RB1P06400 RNU6-481P-201ENST00000384194 107 ntBASIC5.04□□□□□ -1.6
RB1P06400 RNU1-82P-201ENST00000390851 165 ntBASIC5.04□□□□□ -1.6
RB1P06400 Z98745.1-201ENST00000402553 494 ntBASIC5.04□□□□□ -1.6
RB1P06400 AP000357.1-201ENST00000409926 1165 ntBASIC5.04□□□□□ -1.6
RB1P06400 AL445183.3-201ENST00000414168 502 ntBASIC5.04□□□□□ -1.6
RB1P06400 LINC01881-201ENST00000416103 412 ntBASIC5.04□□□□□ -1.6
RB1P06400 AC008173.1-201ENST00000418901 264 ntBASIC5.04□□□□□ -1.6
RB1P06400 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.04□□□□□ -1.6
RB1P06400 AC099063.2-201ENST00000446360 662 ntBASIC5.04□□□□□ -1.6
RB1P06400 AL096829.2-201ENST00000446582 742 ntBASIC5.04□□□□□ -1.6
RB1P06400 CYCSP34-201ENST00000458172 304 ntBASIC5.04□□□□□ -1.6
RB1P06400 PPM1AP1-201ENST00000502740 1135 ntBASIC5.04□□□□□ -1.6
RB1P06400 AC112198.4-201ENST00000515450 351 ntBASIC5.04□□□□□ -1.6
RB1P06400 RNU6-709P-201ENST00000517257 104 ntBASIC5.04□□□□□ -1.6
RB1P06400 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.04□□□□□ -1.6
RB1P06400 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.04□□□□□ -1.6
RB1P06400 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.04□□□□□ -1.6
RB1P06400 AP000827.1-201ENST00000527814 258 ntBASIC5.04□□□□□ -1.6
RB1P06400 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RB1P06400 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.04□□□□□ -1.6
RB1P06400 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.04□□□□□ -1.6
RB1P06400 GLRXP2-201ENST00000555594 321 ntBASIC5.04□□□□□ -1.6
RB1P06400 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.04□□□□□ -1.6
RB1P06400 AC068714.1-201ENST00000559623 800 ntBASIC5.04□□□□□ -1.6
RB1P06400 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RB1P06400 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.04□□□□□ -1.6
RB1P06400 VN1R85P-201ENST00000601587 426 ntBASIC5.04□□□□□ -1.6
RB1P06400 BNIP3P31-201ENST00000604515 566 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms