Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL2A1P02458 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL2A1P02458 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL2A1P02458 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL2A1P02458 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL2A1P02458 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL2A1P02458 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.89□□□□□ -1.63
COL2A1P02458 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL2A1P02458 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL2A1P02458 AC004448.2-201ENST00000422360 586 ntBASIC4.89□□□□□ -1.63
COL2A1P02458 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.89□□□□□ -1.63
COL2A1P02458 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.89□□□□□ -1.63
COL2A1P02458 MTATP6P17-201ENST00000431030 672 ntBASIC4.89□□□□□ -1.63
COL2A1P02458 MTND1P26-201ENST00000440488 538 ntBASIC4.89□□□□□ -1.63
COL2A1P02458 RAD23BP3-201ENST00000454157 1152 ntBASIC4.89□□□□□ -1.63
COL2A1P02458 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.89□□□□□ -1.63
COL2A1P02458 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.89□□□□□ -1.63
COL2A1P02458 RPL7P15-201ENST00000461190 712 ntBASIC4.89□□□□□ -1.63
COL2A1P02458 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.89□□□□□ -1.63
COL2A1P02458 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.89□□□□□ -1.63
COL2A1P02458 PHBP17-201ENST00000528576 541 ntBASIC4.89□□□□□ -1.63
COL2A1P02458 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.89□□□□□ -1.63
COL2A1P02458 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.89□□□□□ -1.63
COL2A1P02458 AL132657.2-201ENST00000564417 358 ntBASIC4.89□□□□□ -1.63
COL2A1P02458 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.89□□□□□ -1.63
COL2A1P02458 AC114878.2-201ENST00000604863 1251 ntBASIC4.89□□□□□ -1.63
COL2A1P02458 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.89□□□□□ -1.63
COL2A1P02458 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.89□□□□□ -1.63
COL2A1P02458 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
COL2A1P02458 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
COL2A1P02458 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL2A1P02458 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.89□□□□□ -1.63
COL2A1P02458 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL2A1P02458 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.89□□□□□ -1.63
COL2A1P02458 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL2A1P02458 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
COL2A1P02458 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL2A1P02458 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.89□□□□□ -1.63
COL2A1P02458 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL2A1P02458 SNORA60-201ENST00000362396 134 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.88□□□□□ -1.63
COL2A1P02458 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.88□□□□□ -1.63
COL2A1P02458 KRR1P1-201ENST00000419430 803 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.88□□□□□ -1.63
COL2A1P02458 RPL7P2-201ENST00000427639 268 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 TPT1P1-201ENST00000458495 518 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.88□□□□□ -1.63
COL2A1P02458 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.88□□□□□ -1.63
COL2A1P02458 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL2A1P02458 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.88□□□□□ -1.63
COL2A1P02458 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.88□□□□□ -1.63
COL2A1P02458 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.88□□□□□ -1.63
COL2A1P02458 AL451064.1-201ENST00000607718 471 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 AC096577.2-201ENST00000611455 153 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL2A1P02458 CR392039.5-201ENST00000623201 510 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.88□□□□□ -1.63
COL2A1P02458 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COL2A1P02458 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL2A1P02458 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL2A1P02458 AL022322.2-201ENST00000624072 20397 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL2A1P02458 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
COL2A1P02458 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.88□□□□□ -1.63
COL2A1P02458 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL2A1P02458 AL121839.2-201ENST00000565058 6943 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL2A1P02458 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
COL2A1P02458 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.88□□□□□ -1.63
COL2A1P02458 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COL2A1P02458 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL2A1P02458 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.88□□□□□ -1.63
COL2A1P02458 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL2A1P02458 MIR7-3-201ENST00000384898 110 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL2A1P02458 GOT2P5-201ENST00000433995 546 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.88□□□□□ -1.63
COL2A1P02458 AL157884.3-201ENST00000448273 1184 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 AC089999.1-201ENST00000460336 374 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 OR52A4P-202ENST00000481634 799 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 OR52A4P-203ENST00000498233 1014 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.88□□□□□ -1.63
COL2A1P02458 RN7SKP157-201ENST00000516174 282 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 MTND1P36-201ENST00000522384 936 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.88□□□□□ -1.63
COL2A1P02458 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.88□□□□□ -1.63
COL2A1P02458 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.88□□□□□ -1.63
COL2A1P02458 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.88□□□□□ -1.63
COL2A1P02458 RPL21P7-201ENST00000557463 483 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.88□□□□□ -1.63
COL2A1P02458 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.88□□□□□ -1.63
COL2A1P02458 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.88□□□□□ -1.63
COL2A1P02458 QTRT1P1-201ENST00000604344 1078 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 AC084757.4-201ENST00000616350 526 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 AL353684.1-201ENST00000622677 1120 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 MIR6500-201ENST00000622700 86 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 AC073592.7-201ENST00000623659 507 ntBASIC4.88□□□□□ -1.63
COL2A1P02458 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL2A1P02458 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.88□□□□□ -1.63
COL2A1P02458 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms