Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFP01375 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFP01375 AC025627.2-201ENST00000576220 160 ntBASIC4.03□□□□□ -1.76
TNFP01375 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFP01375 AC090246.1-201ENST00000616499 426 ntBASIC4.03□□□□□ -1.76
TNFP01375 MIR7702-201ENST00000621931 59 ntBASIC4.03□□□□□ -1.76
TNFP01375 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFP01375 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TNFP01375 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFP01375 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.77
TNFP01375 ERCC6-202ENST00000374127 1782 ntBASIC4.02□□□□□ -1.77
TNFP01375 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
TNFP01375 DDX18P6-201ENST00000450119 1997 ntBASIC4.02□□□□□ -1.77
TNFP01375 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFP01375 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.02□□□□□ -1.77
TNFP01375 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.02□□□□□ -1.77
TNFP01375 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
TNFP01375 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFP01375 RN7SKP224-201ENST00000364140 325 ntBASIC4.02□□□□□ -1.77
TNFP01375 MIR134-201ENST00000385258 73 ntBASIC4.02□□□□□ -1.77
TNFP01375 RNA5SP372-201ENST00000390836 115 ntBASIC4.02□□□□□ -1.77
TNFP01375 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFP01375 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.02□□□□□ -1.77
TNFP01375 RN7SKP202-201ENST00000410439 330 ntBASIC4.02□□□□□ -1.77
TNFP01375 RNU2-22P-201ENST00000411266 212 ntBASIC4.02□□□□□ -1.77
TNFP01375 CBX1P3-201ENST00000413296 527 ntBASIC4.02□□□□□ -1.77
TNFP01375 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.02□□□□□ -1.77
TNFP01375 AL691449.1-201ENST00000426570 421 ntBASIC4.02□□□□□ -1.77
TNFP01375 PRELID3BP10-201ENST00000431957 584 ntBASIC4.02□□□□□ -1.77
TNFP01375 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFP01375 AC079804.1-201ENST00000461922 436 ntBASIC4.02□□□□□ -1.77
TNFP01375 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFP01375 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFP01375 AC008694.2-201ENST00000517591 306 ntBASIC4.02□□□□□ -1.77
TNFP01375 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.02□□□□□ -1.77
TNFP01375 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFP01375 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFP01375 AL358913.1-201ENST00000554342 121 ntBASIC4.02□□□□□ -1.77
TNFP01375 MIR7151-201ENST00000617477 60 ntBASIC4.02□□□□□ -1.77
TNFP01375 MIR6500-201ENST00000622700 86 ntBASIC4.02□□□□□ -1.77
TNFP01375 AP005264.7-201ENST00000625003 745 ntBASIC4.02□□□□□ -1.77
TNFP01375 Z95327.2-201ENST00000414579 1873 ntBASIC4.02□□□□□ -1.77
TNFP01375 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.02□□□□□ -1.77
TNFP01375 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TNFP01375 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TNFP01375 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFP01375 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFP01375 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFP01375 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFP01375 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFP01375 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFP01375 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
TNFP01375 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TNFP01375 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
TNFP01375 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFP01375 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFP01375 AL050305.1-201ENST00000399993 1230 ntBASIC4.01□□□□□ -1.77
TNFP01375 VN1R8P-201ENST00000407739 893 ntBASIC4.01□□□□□ -1.77
TNFP01375 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.01□□□□□ -1.77
TNFP01375 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFP01375 ARAFP2-201ENST00000440565 559 ntBASIC4.01□□□□□ -1.77
TNFP01375 VN1R105P-201ENST00000486595 910 ntBASIC4.01□□□□□ -1.77
TNFP01375 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.01□□□□□ -1.77
TNFP01375 TCP11X3P-202ENST00000514289 1254 ntBASIC4.01□□□□□ -1.77
TNFP01375 RNU6-1334P-201ENST00000516032 105 ntBASIC4.01□□□□□ -1.77
TNFP01375 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TNFP01375 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.01□□□□□ -1.77
TNFP01375 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.01□□□□□ -1.77
TNFP01375 AC034105.4-201ENST00000568304 277 ntBASIC4.01□□□□□ -1.77
TNFP01375 AC120057.2-201ENST00000571520 271 ntBASIC4.01□□□□□ -1.77
TNFP01375 RPL23AP87-202ENST00000573039 466 ntBASIC4.01□□□□□ -1.77
TNFP01375 AC012417.1-201ENST00000582307 1039 ntBASIC4.01□□□□□ -1.77
TNFP01375 MIR5684-201ENST00000585074 65 ntBASIC4.01□□□□□ -1.77
TNFP01375 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TNFP01375 AC005255.1-201ENST00000593748 216 ntBASIC4.01□□□□□ -1.77
TNFP01375 AC233280.2-201ENST00000603917 1070 ntBASIC4.01□□□□□ -1.77
TNFP01375 AL353600.1-201ENST00000608148 251 ntBASIC4.01□□□□□ -1.77
TNFP01375 OR7M1P-201ENST00000608946 533 ntBASIC4.01□□□□□ -1.77
TNFP01375 AC034229.5-201ENST00000624258 185 ntBASIC4.01□□□□□ -1.77
TNFP01375 CDRT1-208ENST00000630868 794 ntBASIC4.01□□□□□ -1.77
TNFP01375 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
TNFP01375 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
TNFP01375 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
TNFP01375 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TNFP01375 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
TNFP01375 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
TNFP01375 NOL8P1-201ENST00000508336 3529 ntBASIC4□□□□□ -1.77
TNFP01375 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TNFP01375 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TNFP01375 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TNFP01375 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TNFP01375 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4□□□□□ -1.77
TNFP01375 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TNFP01375 SNORD35B-201ENST00000363660 87 ntBASIC4□□□□□ -1.77
TNFP01375 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4□□□□□ -1.77
TNFP01375 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TNFP01375 RPL32P23-201ENST00000397237 405 ntBASIC4□□□□□ -1.77
TNFP01375 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4□□□□□ -1.77
TNFP01375 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4□□□□□ -1.77
TNFP01375 HMGB3P5-201ENST00000428894 612 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms