Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL589826.1-201ENST00000340697 249 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 RNU1-130P-201ENST00000363930 160 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 SNORA48.4-201ENST00000391089 134 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 AC105402.1-201ENST00000413336 545 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 RANP4-201ENST00000413361 655 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 AC073464.3-201ENST00000422564 712 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 RPL37P1-201ENST00000432310 284 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFBP01127 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFBP01127 MTND2P3-201ENST00000452458 470 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 AC091959.2-201ENST00000477363 321 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFBP01127 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFBP01127 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFBP01127 TRAV8-5-201ENST00000537369 341 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFBP01127 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.67□□□□□ -1.66
PDGFBP01127 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFBP01127 AC090312.1-201ENST00000580637 348 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 VN1R84P-201ENST00000593697 235 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 AF131215.7-201ENST00000602443 707 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.67□□□□□ -1.66
PDGFBP01127 MIR6867-201ENST00000610636 67 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFBP01127 AC007786.3-201ENST00000615154 596 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 MIR6875-201ENST00000617506 72 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFBP01127 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.67□□□□□ -1.66
PDGFBP01127 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.67□□□□□ -1.66
PDGFBP01127 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFBP01127 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFBP01127 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
PDGFBP01127 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFBP01127 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PDGFBP01127 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PDGFBP01127 AC015813.6-201ENST00000624409 5808 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 VN2R3P-201ENST00000422626 1412 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.66□□□□□ -1.66
PDGFBP01127 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 LINC01109-201ENST00000603837 3081 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PDGFBP01127 RN7SKP74-201ENST00000362849 309 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 RNU6-185P-201ENST00000384421 107 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 RNU6-244P-201ENST00000391028 104 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 RN7SKP159-201ENST00000410657 292 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 SETP15-201ENST00000412724 337 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.66□□□□□ -1.66
PDGFBP01127 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.66□□□□□ -1.66
PDGFBP01127 AL160175.1-201ENST00000428124 247 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 AC073069.1-201ENST00000428657 441 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFBP01127 MTCO1P54-201ENST00000430139 712 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFBP01127 MTND4LP7-201ENST00000431728 294 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 RPS26P4-201ENST00000431743 355 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFBP01127 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.66□□□□□ -1.66
PDGFBP01127 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.66□□□□□ -1.66
PDGFBP01127 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFBP01127 AC146944.2-203ENST00000502493 354 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 DSTNP2-201ENST00000504533 515 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFBP01127 AC139495.1-202ENST00000513164 354 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 AC108064.1-201ENST00000513791 460 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.66□□□□□ -1.66
PDGFBP01127 AP000827.1-201ENST00000527814 258 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.66□□□□□ -1.66
PDGFBP01127 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 RN7SL339P-201ENST00000580597 296 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 AP001160.4-201ENST00000596971 382 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 MTCO3P22-201ENST00000603219 784 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 AC012468.1-201ENST00000604888 430 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFBP01127 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFBP01127 AC039056.2-201ENST00000622261 511 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFBP01127 AC079298.2-201ENST00000623885 459 ntBASIC4.66□□□□□ -1.66
PDGFBP01127 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFBP01127 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.66□□□□□ -1.66
PDGFBP01127 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PDGFBP01127 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDGFBP01127 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.66□□□□□ -1.66
PDGFBP01127 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.65□□□□□ -1.66
PDGFBP01127 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.65□□□□□ -1.66
PDGFBP01127 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PDGFBP01127 MUC2-202ENST00000613187 4845 ntBASIC4.65□□□□□ -1.66
PDGFBP01127 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDGFBP01127 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.65□□□□□ -1.66
PDGFBP01127 SNORA63.1-201ENST00000362493 131 ntBASIC4.65□□□□□ -1.67
PDGFBP01127 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms