Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC006011.1-201ENST00000442758 349 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 EXTL2P1-201ENST00000446218 416 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 RN7SL354P-201ENST00000469282 294 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 RN7SL271P-201ENST00000487601 295 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 RWDD4P1-201ENST00000488019 565 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC3.26□□□□□ -1.89
SSSCA1O60232 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
SSSCA1O60232 IGKV1-32-201ENST00000519290 311 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.26□□□□□ -1.89
SSSCA1O60232 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.26□□□□□ -1.89
SSSCA1O60232 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.26□□□□□ -1.89
SSSCA1O60232 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.26□□□□□ -1.89
SSSCA1O60232 PCNPP1-201ENST00000552501 511 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.26□□□□□ -1.89
SSSCA1O60232 AC022968.1-201ENST00000567372 442 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.26□□□□□ -1.89
SSSCA1O60232 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSSCA1O60232 AC114878.2-201ENST00000604863 1251 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 FAM27D1-201ENST00000612308 341 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 AC124312.6-202ENST00000623624 418 ntBASIC3.26□□□□□ -1.89
SSSCA1O60232 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.26□□□□□ -1.89
SSSCA1O60232 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.26□□□□□ -1.89
SSSCA1O60232 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSSCA1O60232 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AC093909.5-201ENST00000621839 1799 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.25□□□□□ -1.89
SSSCA1O60232 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSSCA1O60232 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AC025031.4-201ENST00000621248 3271 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 AC116667.1-201ENST00000604855 2072 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 AC103591.2-201ENST00000265259 766 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.25□□□□□ -1.89
SSSCA1O60232 MIR423-201ENST00000362201 94 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 RNA5SP435-201ENST00000364044 108 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSSCA1O60232 AL138878.1-201ENST00000405131 347 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 RPL37P18-201ENST00000411602 243 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 RPL12P3-201ENST00000440080 396 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 AC073648.4-201ENST00000442655 781 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.25□□□□□ -1.89
SSSCA1O60232 MTCO3P20-201ENST00000454926 688 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.25□□□□□ -1.89
SSSCA1O60232 MTND1P6-201ENST00000523621 946 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 OR7E10P-201ENST00000526420 991 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AP000676.2-201ENST00000529711 301 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSSCA1O60232 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.25□□□□□ -1.89
SSSCA1O60232 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.25□□□□□ -1.89
SSSCA1O60232 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AC068446.3-201ENST00000555285 382 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AC025627.2-201ENST00000576220 160 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.25□□□□□ -1.89
SSSCA1O60232 MIR4646-201ENST00000580775 63 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AC023813.4-201ENST00000607580 580 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.25□□□□□ -1.89
SSSCA1O60232 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AP003497.2-201ENST00000624220 967 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SSSCA1O60232 AL592148.3-201ENST00000608771 2646 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 AL158163.1-201ENST00000603915 1649 ntBASIC3.25□□□□□ -1.89
SSSCA1O60232 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSSCA1O60232 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSSCA1O60232 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSSCA1O60232 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.25□□□□□ -1.89
SSSCA1O60232 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.24□□□□□ -1.89
SSSCA1O60232 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.24□□□□□ -1.89
SSSCA1O60232 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSSCA1O60232 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSSCA1O60232 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SSSCA1O60232 RHEBP3-201ENST00000411920 351 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.24□□□□□ -1.89
SSSCA1O60232 AL356387.2-201ENST00000422272 243 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 AL358472.1-201ENST00000431295 329 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 AC009263.1-201ENST00000441193 1239 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 HIGD1AP8-201ENST00000453927 274 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 MTCO3P16-201ENST00000454456 754 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSSCA1O60232 RN7SL98P-201ENST00000462271 300 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 RPS27AP16-201ENST00000492222 470 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.24□□□□□ -1.89
SSSCA1O60232 KCTD9P2-201ENST00000512203 1013 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 RNA5SP49-201ENST00000516450 115 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 BRD9P1-201ENST00000529855 560 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.24□□□□□ -1.89
SSSCA1O60232 CBX3P5-201ENST00000552017 521 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.24□□□□□ -1.89
SSSCA1O60232 MIR5684-201ENST00000585074 65 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 BRDTP1-201ENST00000605735 677 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.24□□□□□ -1.89
SSSCA1O60232 AC090948.2-201ENST00000607363 564 ntBASIC3.24□□□□□ -1.89
SSSCA1O60232 AL035461.2-201ENST00000619201 524 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms