Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MTATP6P31-201ENST00000406985 692 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX4O60224 AL590609.2-201ENST00000421430 368 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX4O60224 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX4O60224 AC092013.1-201ENST00000438795 332 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AC009263.1-201ENST00000441193 1239 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AC005002.1-201ENST00000447458 540 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AL050341.1-201ENST00000447743 313 ntBASIC4.48□□□□□ -1.69
SSX4O60224 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX4O60224 AC104634.1-201ENST00000452720 462 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.48□□□□□ -1.69
SSX4O60224 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 RN7SL809P-201ENST00000482040 297 ntBASIC4.48□□□□□ -1.69
SSX4O60224 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX4O60224 HPRT1P1-201ENST00000509498 657 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.48□□□□□ -1.69
SSX4O60224 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 AC092593.2-201ENST00000513866 913 ntBASIC4.48□□□□□ -1.69
SSX4O60224 ENPP7P9-201ENST00000514456 627 ntBASIC4.48□□□□□ -1.69
SSX4O60224 PRELID3BP4-201ENST00000515476 571 ntBASIC4.48□□□□□ -1.69
SSX4O60224 RNA5SP373-201ENST00000517271 95 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX4O60224 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX4O60224 PCNPP1-201ENST00000552501 511 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX4O60224 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.48□□□□□ -1.69
SSX4O60224 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.48□□□□□ -1.69
SSX4O60224 MTND4LP24-201ENST00000572277 291 ntBASIC4.48□□□□□ -1.69
SSX4O60224 CYCSP40-201ENST00000575927 294 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AC115085.1-201ENST00000588924 229 ntBASIC4.48□□□□□ -1.69
SSX4O60224 VN1R84P-201ENST00000593697 235 ntBASIC4.48□□□□□ -1.69
SSX4O60224 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX4O60224 EIF1P6-201ENST00000600054 334 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 AC005377.1-201ENST00000605126 456 ntBASIC4.48□□□□□ -1.69
SSX4O60224 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX4O60224 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSX4O60224 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.48□□□□□ -1.69
SSX4O60224 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX4O60224 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.48□□□□□ -1.69
SSX4O60224 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSX4O60224 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.48□□□□□ -1.69
SSX4O60224 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSX4O60224 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SSX4O60224 NSRP1P1-201ENST00000444067 1693 ntBASIC4.48□□□□□ -1.69
SSX4O60224 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.48□□□□□ -1.69
SSX4O60224 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
SSX4O60224 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX4O60224 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX4O60224 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX4O60224 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX4O60224 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX4O60224 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX4O60224 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSX4O60224 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX4O60224 RN7SKP104-201ENST00000362605 328 ntBASIC4.47□□□□□ -1.69
SSX4O60224 RNU1-94P-201ENST00000362627 173 ntBASIC4.47□□□□□ -1.69
SSX4O60224 RNA5SP123-201ENST00000363244 119 ntBASIC4.47□□□□□ -1.69
SSX4O60224 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSX4O60224 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.47□□□□□ -1.69
SSX4O60224 NCSTNP1-201ENST00000406229 144 ntBASIC4.47□□□□□ -1.69
SSX4O60224 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.47□□□□□ -1.69
SSX4O60224 TMBIM7P-201ENST00000418074 855 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC004690.1-201ENST00000418216 328 ntBASIC4.47□□□□□ -1.69
SSX4O60224 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX4O60224 NPM1P24-201ENST00000428039 894 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC073069.1-201ENST00000428657 441 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.47□□□□□ -1.69
SSX4O60224 RPS7P5-201ENST00000441482 581 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC073648.4-201ENST00000442655 781 ntBASIC4.47□□□□□ -1.69
SSX4O60224 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX4O60224 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX4O60224 YWHAQP9-201ENST00000445891 512 ntBASIC4.47□□□□□ -1.69
SSX4O60224 RPS6P2-201ENST00000454208 705 ntBASIC4.47□□□□□ -1.69
SSX4O60224 CDC42P1-201ENST00000456658 548 ntBASIC4.47□□□□□ -1.69
SSX4O60224 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX4O60224 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX4O60224 AC018635.1-201ENST00000468292 1030 ntBASIC4.47□□□□□ -1.69
SSX4O60224 RPL23AP71-201ENST00000470966 469 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC022133.1-201ENST00000490961 571 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC020890.1-201ENST00000491837 504 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC005412.2-201ENST00000492004 341 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.47□□□□□ -1.69
SSX4O60224 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSX4O60224 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.47□□□□□ -1.69
SSX4O60224 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX4O60224 RPL23AP53-201ENST00000521854 457 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX4O60224 BRD9P1-201ENST00000529855 560 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms