Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.31□□□□□ -1.72
LSM1O15116 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.31□□□□□ -1.72
LSM1O15116 RPL23AP97-201ENST00000568955 471 ntBASIC4.31□□□□□ -1.72
LSM1O15116 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.31□□□□□ -1.72
LSM1O15116 AC015911.5-201ENST00000587076 451 ntBASIC4.31□□□□□ -1.72
LSM1O15116 AL133338.2-201ENST00000604292 736 ntBASIC4.31□□□□□ -1.72
LSM1O15116 AC133644.2-201ENST00000608142 540 ntBASIC4.31□□□□□ -1.72
LSM1O15116 AC107905.1-201ENST00000616204 426 ntBASIC4.31□□□□□ -1.72
LSM1O15116 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.31□□□□□ -1.72
LSM1O15116 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LSM1O15116 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
LSM1O15116 AC019080.5-201ENST00000624891 757 ntBASIC4.31□□□□□ -1.72
LSM1O15116 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.31□□□□□ -1.72
LSM1O15116 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.31□□□□□ -1.72
LSM1O15116 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LSM1O15116 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
LSM1O15116 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.31□□□□□ -1.72
LSM1O15116 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.31□□□□□ -1.72
LSM1O15116 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LSM1O15116 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LSM1O15116 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
LSM1O15116 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LSM1O15116 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LSM1O15116 AC007685.1-201ENST00000329806 452 ntBASIC4.3□□□□□ -1.72
LSM1O15116 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LSM1O15116 MIR320B1-201ENST00000390209 79 ntBASIC4.3□□□□□ -1.72
LSM1O15116 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LSM1O15116 AL645927.1-201ENST00000396783 406 ntBASIC4.3□□□□□ -1.72
LSM1O15116 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.3□□□□□ -1.72
LSM1O15116 AL607077.1-201ENST00000401718 499 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.3□□□□□ -1.72
LSM1O15116 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.3□□□□□ -1.72
LSM1O15116 AC048351.1-201ENST00000420064 602 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AJ239321.1-201ENST00000424255 564 ntBASIC4.3□□□□□ -1.72
LSM1O15116 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.3□□□□□ -1.72
LSM1O15116 RPL7P4-203ENST00000430239 730 ntBASIC4.3□□□□□ -1.72
LSM1O15116 RPL23AP93-201ENST00000440847 484 ntBASIC4.3□□□□□ -1.72
LSM1O15116 HMGB1P16-201ENST00000447155 540 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AC012671.1-201ENST00000451912 203 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.3□□□□□ -1.72
LSM1O15116 AC018638.3-201ENST00000461273 132 ntBASIC4.3□□□□□ -1.72
LSM1O15116 RPL5P13-201ENST00000462840 709 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AC011005.3-201ENST00000491624 395 ntBASIC4.3□□□□□ -1.72
LSM1O15116 RPS4XP14-201ENST00000493072 781 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.3□□□□□ -1.72
LSM1O15116 AC006499.6-201ENST00000511169 607 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AC015795.1-201ENST00000513669 327 ntBASIC4.3□□□□□ -1.72
LSM1O15116 SNORD116-26-201ENST00000516006 96 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.3□□□□□ -1.72
LSM1O15116 AP000676.2-201ENST00000529711 301 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.3□□□□□ -1.72
LSM1O15116 AC084757.1-201ENST00000559987 490 ntBASIC4.3□□□□□ -1.72
LSM1O15116 UBE2FP2-201ENST00000566646 462 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AC091042.1-201ENST00000579213 173 ntBASIC4.3□□□□□ -1.72
LSM1O15116 MIR4646-201ENST00000580775 63 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.3□□□□□ -1.72
LSM1O15116 OR7E18P-201ENST00000592589 702 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AC020914.4-201ENST00000597690 277 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AL160290.3-201ENST00000604869 165 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AC005084.1-201ENST00000605160 304 ntBASIC4.3□□□□□ -1.72
LSM1O15116 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.3□□□□□ -1.72
LSM1O15116 AC016957.2-201ENST00000616998 848 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.3□□□□□ -1.72
LSM1O15116 AC018445.2-201ENST00000622987 260 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
LSM1O15116 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.3□□□□□ -1.72
LSM1O15116 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.3□□□□□ -1.72
LSM1O15116 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LSM1O15116 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LSM1O15116 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LSM1O15116 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
LSM1O15116 AC097504.1-201ENST00000515103 2415 ntBASIC4.3□□□□□ -1.72
LSM1O15116 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
LSM1O15116 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LSM1O15116 AC083899.2-201ENST00000423285 1376 ntBASIC4.29□□□□□ -1.72
LSM1O15116 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LSM1O15116 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.29□□□□□ -1.72
LSM1O15116 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
LSM1O15116 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LSM1O15116 RNU6-891P-201ENST00000384280 111 ntBASIC4.29□□□□□ -1.72
LSM1O15116 MIR659-201ENST00000384963 97 ntBASIC4.29□□□□□ -1.72
LSM1O15116 MIR105-2-201ENST00000385083 81 ntBASIC4.29□□□□□ -1.72
LSM1O15116 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LSM1O15116 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LSM1O15116 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.29□□□□□ -1.72
LSM1O15116 MAPRE1P3-201ENST00000435438 796 ntBASIC4.29□□□□□ -1.72
LSM1O15116 Z99127.2-201ENST00000441426 334 ntBASIC4.29□□□□□ -1.72
LSM1O15116 RPL23AP43-201ENST00000446445 471 ntBASIC4.29□□□□□ -1.72
LSM1O15116 VN1R32P-201ENST00000452234 905 ntBASIC4.29□□□□□ -1.72
LSM1O15116 AC091685.2-201ENST00000454924 864 ntBASIC4.29□□□□□ -1.72
LSM1O15116 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.29□□□□□ -1.72
LSM1O15116 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.29□□□□□ -1.72
LSM1O15116 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.29□□□□□ -1.72
LSM1O15116 RN7SL177P-201ENST00000476596 299 ntBASIC4.29□□□□□ -1.72
LSM1O15116 IGLV2-34-201ENST00000490007 283 ntBASIC4.29□□□□□ -1.72
LSM1O15116 AC139783.2-201ENST00000504847 1145 ntBASIC4.29□□□□□ -1.72
LSM1O15116 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.29□□□□□ -1.72
LSM1O15116 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.29□□□□□ -1.72
LSM1O15116 AC067904.2-201ENST00000517322 1283 ntBASIC4.29□□□□□ -1.72
LSM1O15116 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms