Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC100770.1-201ENST00000532310 322 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AL020997.2-201ENST00000602607 184 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AC116667.1-201ENST00000604855 2072 ntBASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.48□□□□□ -1.69
SMIM28A0A1B0GU29 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 IQCB2P-201ENST00000401788 1633 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 RNU6-1320P-201ENST00000390838 107 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 RNU6-1269P-201ENST00000391139 107 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 VN1R8P-201ENST00000407739 893 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AC009237.10-201ENST00000414112 510 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 RSL24D1P2-201ENST00000445584 366 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 RAD1P2-201ENST00000446414 663 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AL162151.2-201ENST00000448875 158 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 RNU6-599P-201ENST00000459383 107 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 RNU6-1193P-201ENST00000459461 107 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AC107015.1-201ENST00000466902 747 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AC008694.2-201ENST00000517591 306 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AL049874.4-201ENST00000557593 255 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AC010487.1-201ENST00000594408 1172 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AC020658.4-201ENST00000613987 684 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 RNU6-368P-201ENST00000620928 107 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 RNU6-538P-201ENST00000622329 107 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 RLIMP2-201ENST00000427891 1563 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AC105074.1-201ENST00000623380 3095 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 AC010266.2-201ENST00000564741 3255 ntBASIC4.47□□□□□ -1.69
SMIM28A0A1B0GU29 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.46□□□□□ -1.69
SMIM28A0A1B0GU29 SAMMSON-213ENST00000641336 1521 ntBASIC4.46□□□□□ -1.69
SMIM28A0A1B0GU29 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SMIM28A0A1B0GU29 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC107021.2-201ENST00000567714 2095 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 TCP1P3-201ENST00000414406 1498 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 RN7SKP280-201ENST00000364196 304 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 SNORA37-201ENST00000384504 129 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 RPL21P65-201ENST00000406094 466 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AP000357.1-201ENST00000409926 1165 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 RNU6-628P-201ENST00000410675 107 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 TPT1P2-201ENST00000413105 503 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 RPL17P36-201ENST00000420302 549 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC012519.1-201ENST00000424588 610 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC115285.1-201ENST00000424879 736 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AL138787.1-202ENST00000437804 898 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 RPL21P89-201ENST00000444021 467 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC079804.1-201ENST00000461922 436 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 OR9N1P-201ENST00000491296 333 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 BTG4P1-201ENST00000510421 183 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 SNORA48.9-201ENST00000516419 162 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC063950.1-201ENST00000552036 308 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms