Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 GEMIN8P3-201ENST00000445417 720 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 GAPDHP25-201ENST00000447061 1001 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 RPL7L1P1-201ENST00000448259 785 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC079841.1-201ENST00000481228 950 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC005351.1-201ENST00000511152 786 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 RNU6-1225P-201ENST00000516336 65 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 ARL2BPP5-201ENST00000523141 481 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AP004607.2-201ENST00000533949 322 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC084757.1-201ENST00000559987 490 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 VN1R78P-201ENST00000597393 564 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC244107.2-201ENST00000611773 76 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC026634.1-201ENST00000634369 198 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AF001550.2-201ENST00000636643 217 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 OR52B5P-202ENST00000641118 1110 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AL138820.1-201ENST00000617901 5305 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 U3.2-201ENST00000362981 210 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 SUGT1P1-201ENST00000379514 476 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 SNORA67-201ENST00000384423 137 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 DSTNP4-201ENST00000399472 474 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 RNA5SP487-201ENST00000410186 122 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 DPPA2P3-201ENST00000411853 655 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC004022.2-201ENST00000413824 193 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC108075.1-201ENST00000424692 529 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AL139148.1-201ENST00000427122 680 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 IFNNP1-201ENST00000429219 553 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 RPS26P56-201ENST00000444468 240 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 EXTL2P1-201ENST00000446218 416 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 MTND1P31-201ENST00000449206 961 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AL035090.1-201ENST00000454835 332 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC010307.1-201ENST00000467206 836 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC072052.1-201ENST00000496556 306 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 IGBP1P4-201ENST00000503202 879 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC022790.1-201ENST00000522872 204 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 UBTFL10-201ENST00000528532 562 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC051619.2-201ENST00000559063 397 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC087465.1-201ENST00000560574 245 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 RPL10P14-201ENST00000565265 298 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC074051.3-201ENST00000570238 358 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC005191.1-201ENST00000603950 358 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC009220.3-201ENST00000604318 586 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC016769.4-201ENST00000616893 535 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC121761.2-201ENST00000617300 689 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AP003400.3-201ENST00000624904 346 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 AC074101.1-201ENST00000637861 241 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 SOCS5P3-201ENST00000425115 1576 ntBASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL4A3BPQ9Y5P4 OR55B1P-203ENST00000641518 2602 ntBASIC5.96□□□□□ -1.45
COL4A3BPQ9Y5P4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.96□□□□□ -1.45
COL4A3BPQ9Y5P4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.96□□□□□ -1.46
COL4A3BPQ9Y5P4 ASNSP1-201ENST00000518311 1939 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms