Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC025031.4-201ENST00000621248 3271 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 RNA5SP52-201ENST00000362448 134 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 RNU4-39P-201ENST00000362455 127 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 RNA5SP447-201ENST00000363749 119 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 RN7SKP263-201ENST00000411194 309 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 RPS20P1-201ENST00000434853 354 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 AL353597.2-202ENST00000434901 373 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 ATP1B1P1-201ENST00000509767 915 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 AC069240.1-201ENST00000548774 375 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 AL160290.3-201ENST00000604869 165 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 Z98200.1-201ENST00000607298 470 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 AC090948.1-201ENST00000607464 549 ntBASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTNNA3Q9UI47 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 MIR448-201ENST00000362131 111 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 SNORA11F-201ENST00000408237 128 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 RNU4-25P-201ENST00000410569 230 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 RPL23AP4-201ENST00000427757 463 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 FTH1P16-201ENST00000435241 552 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AC069277.2-201ENST00000454211 432 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 PSMC1P13-201ENST00000458195 985 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 RN7SL810P-201ENST00000493031 276 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 HAUS1P1-201ENST00000505275 832 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AF186190.1-201ENST00000517470 480 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AC138701.1-201ENST00000524329 714 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 PDCD5P1-201ENST00000543528 309 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AL109766.1-201ENST00000555080 552 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AC021483.2-201ENST00000567415 758 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AC015922.4-201ENST00000612568 690 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AL121873.1-201ENST00000616013 524 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 uc_338.13-201ENST00000618243 179 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AC015722.2-201ENST00000622210 551 ntBASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CTNNA3Q9UI47 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AC009951.1-201ENST00000623674 2614 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AC008033.1-201ENST00000216407 1162 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 SNORA48.7-201ENST00000391302 135 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 GSTM3P2-201ENST00000412746 530 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 RPL6P29-201ENST00000414863 865 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AL139095.3-201ENST00000419672 1203 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 KCTD10P1-201ENST00000434203 625 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AC010618.1-201ENST00000469924 477 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 SNX6P1-201ENST00000601728 1224 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AL139395.1-201ENST00000603662 160 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 OR52H1-202ENST00000641796 1061 ntBASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.23□□□□□ -1.57
CTNNA3Q9UI47 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTNNA3Q9UI47 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTNNA3Q9UI47 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.22□□□□□ -1.57
CTNNA3Q9UI47 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTNNA3Q9UI47 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CTNNA3Q9UI47 RN7SKP167-201ENST00000411047 285 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms