Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 SNORA71.2-201ENST00000364941 134 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 MIR550A3-201ENST00000390735 95 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC073069.1-201ENST00000428657 441 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 HMGB3P21-201ENST00000452483 547 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 RPS26P15-201ENST00000488067 348 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 IGLV2-34-201ENST00000490007 283 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC017037.1-201ENST00000508460 471 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC021146.7-201ENST00000509604 775 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC008676.3-201ENST00000521237 435 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC091042.1-201ENST00000579213 173 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 MIR432-201ENST00000606207 94 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC007546.2-201ENST00000623996 360 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AC108467.2-201ENST00000617640 1597 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AL391684.1-202ENST00000641293 1636 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 RNA5SP388-201ENST00000362584 119 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 RN7SKP103-201ENST00000363848 320 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AL133412.1-201ENST00000380194 2992 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 MIR298-201ENST00000401212 88 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 OR51B3P-201ENST00000412287 913 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AC073464.3-201ENST00000422564 712 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AC008072.1-201ENST00000434254 824 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AL772161.1-201ENST00000439130 476 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 RPL7P31-201ENST00000450192 724 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 RN7SL826P-201ENST00000479724 288 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 SCARNA22-201ENST00000503991 125 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 ACTR6P1-201ENST00000514311 1104 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 RNU2-30P-201ENST00000516209 141 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AC092868.3-201ENST00000560515 784 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 NPM1P47-201ENST00000560843 856 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 UBE2FP2-201ENST00000566646 462 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 RPL23AP97-201ENST00000568955 471 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 MIR4737-201ENST00000583979 81 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 MIR6853-201ENST00000619642 74 ntBASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CCNB1IP1Q9NPC3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 AL607077.1-201ENST00000401718 499 ntBASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 RN7SKP100-201ENST00000411258 284 ntBASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 RSU1P3-201ENST00000412878 835 ntBASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 TRGV6-201ENST00000417928 299 ntBASIC4.1□□□□□ -1.75
CCNB1IP1Q9NPC3 AC004074.1-201ENST00000421810 1063 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms