Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 XKRX-201ENST00000372956 2848 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 NELL2-212ENST00000549027 3036 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RHOT1-210ENST00000581094 3231 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RP1-206ENST00000636932 3649 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SAA2-201ENST00000256733 563 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 LST1-203ENST00000339530 635 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORA63.1-201ENST00000362493 131 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 U3.6-201ENST00000363622 211 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-681P-201ENST00000364012 104 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RNA5SP379-201ENST00000364599 113 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU4-9P-201ENST00000364951 139 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SKP80-201ENST00000365188 283 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.360-201ENST00000365512 102 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 PDZD11-202ENST00000374454 784 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 UQCRQ-202ENST00000378667 429 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-178P-201ENST00000384631 104 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 U3.24-201ENST00000391177 215 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 DHFRP6-201ENST00000401776 268 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AL356421.1-201ENST00000403255 413 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AL450346.1-201ENST00000403497 559 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 BZW2-203ENST00000407633 898 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-1199P-201ENST00000411249 104 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SKP172-201ENST00000411341 298 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01703-201ENST00000412855 423 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC013404.1-201ENST00000413068 249 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 MRPS18BP1-201ENST00000414228 192 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC092418.1-201ENST00000415328 623 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC073957.1-201ENST00000418941 535 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 FGF1-208ENST00000419524 683 ntAPPRIS P1 TSL 4 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC245028.1-201ENST00000423259 256 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 EIF4HP2-201ENST00000424380 563 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 PGAM1P6-201ENST00000425684 747 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC093106.2-201ENST00000428212 385 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC073069.1-201ENST00000428657 441 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 IGLVIVOR22-2-201ENST00000430579 330 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC099066.3-201ENST00000434499 301 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 TMEM256P2-201ENST00000440241 341 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SNHG14-204ENST00000441592 608 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AP000561.1-201ENST00000444130 435 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC083939.1-201ENST00000445475 126 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 EEF1B2P6-201ENST00000445713 673 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AL109613.1-205ENST00000446684 714 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RPS4XP11-201ENST00000446897 772 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 PPIAP7-201ENST00000454070 489 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC00963-207ENST00000454635 910 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC005105.1-201ENST00000454851 792 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 snoU13.30-201ENST00000458951 104 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RPS23P7-201ENST00000466210 444 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC018638.2-201ENST00000471258 403 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 DMKN-239ENST00000474928 577 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC103975.1-201ENST00000482506 483 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 TRBV5-2-201ENST00000489095 273 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 CREM-242ENST00000490511 469 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 FTH1P8-201ENST00000498161 514 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02115-201ENST00000503367 432 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 MRPS33P2-201ENST00000507850 322 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC063980.1-201ENST00000514282 414 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORA25.13-201ENST00000516395 103 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RNY4P20-201ENST00000516678 93 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-1092P-201ENST00000516955 87 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC022784.6-205ENST00000518619 807 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC087664.3-201ENST00000524110 328 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 VPS28-204ENST00000526054 892 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 CKLF-CMTM1-201ENST00000527729 585 ntAPPRIS P3 TSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC079602.2-201ENST00000538389 283 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AL662844.2-201ENST00000538455 284 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC133555.1-201ENST00000546408 259 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC25A3P2-201ENST00000547720 880 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC117372.1-201ENST00000548633 620 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AL132639.1-201ENST00000553698 475 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM181A-AS1-201ENST00000554538 545 ntTSL 4 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 EDDM3DP-201ENST00000554692 434 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 C14orf178-203ENST00000556047 546 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AL109628.1-201ENST00000556877 366 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 IGHV3OR16-15-201ENST00000565463 414 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms