Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 Y_RNA.380-201ENST00000365663 111 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 SNORA10B-201ENST00000384458 133 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 RNU6-713P-201ENST00000384761 107 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 H2AFZP3-201ENST00000394213 387 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 NHP2P2-201ENST00000396362 460 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 MIR450B-201ENST00000401182 78 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 RNU6-1050P-201ENST00000410388 107 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 RN7SKP261-201ENST00000410948 278 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 RPL36P18-201ENST00000419316 318 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 PGBD4P6-201ENST00000421501 610 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC083862.1-201ENST00000427378 1242 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC022022.1-201ENST00000430304 178 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 RPL37P1-201ENST00000432310 284 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 FTH1P1-201ENST00000437933 532 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AL031584.1-201ENST00000447169 754 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC019080.2-201ENST00000453859 394 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC108059.3-201ENST00000456388 214 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 snoU13.8-201ENST00000458890 104 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC087385.2-201ENST00000477729 498 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 FTH1P8-201ENST00000498161 514 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC020893.1-201ENST00000502452 580 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 RNU2-10P-201ENST00000516375 211 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 RN7SKP96-201ENST00000516948 297 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC112191.2-201ENST00000522428 333 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC115085.1-201ENST00000588924 229 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC011626.1-201ENST00000604710 562 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC010424.2-201ENST00000607594 443 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC000068.3-201ENST00000607934 427 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 OR6L2P-201ENST00000608207 925 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 AP001486.3-201ENST00000615334 372 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 TMCC1P1-201ENST00000518897 1980 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC007406.5-201ENST00000570140 3170 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 RNU6-562P-201ENST00000362731 107 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 Y_RNA.234-201ENST00000364409 97 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 RNU6-472P-201ENST00000384299 107 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 MIR181C-201ENST00000384881 110 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AL359643.1-201ENST00000404109 423 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 UBE2V1P14-201ENST00000415815 558 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AL161742.1-201ENST00000418154 584 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 E2F6P2-201ENST00000420708 748 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 MED15P9-201ENST00000424716 533 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC009299.1-201ENST00000429684 717 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AL590233.1-201ENST00000430017 456 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms