Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC018618.2-201ENST00000604770 446 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 AC007349.4-201ENST00000608114 532 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 AC013468.1-201ENST00000608680 598 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 AC109309.2-201ENST00000612597 332 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 RPSAP73-201ENST00000614820 330 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.79□□□□□ -1.8
VGLL1Q99990 AL158196.1-201ENST00000616786 434 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 AL121890.2-201ENST00000617644 465 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.79□□□□□ -1.8
VGLL1Q99990 AC073569.3-201ENST00000619055 682 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 AC005840.5-201ENST00000619166 599 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 AC078883.4-201ENST00000623218 367 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 AC010435.1-201ENST00000623353 1177 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 AC011815.3-201ENST00000624194 473 ntBASIC3.79□□□□□ -1.8
VGLL1Q99990 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.79□□□□□ -1.8
VGLL1Q99990 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.79□□□□□ -1.8
VGLL1Q99990 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.79□□□□□ -1.8
VGLL1Q99990 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
VGLL1Q99990 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VGLL1Q99990 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AL133268.1-201ENST00000405676 1401 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 AC107068.1-201ENST00000563286 4218 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 SALL4P2-201ENST00000423288 2910 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.78□□□□□ -1.8
VGLL1Q99990 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.78□□□□□ -1.8
VGLL1Q99990 A2MP1-204ENST00000566278 4130 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.78□□□□□ -1.8
VGLL1Q99990 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 OR52B1P-201ENST00000316506 909 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 ANKRD36P1-201ENST00000344424 659 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 IL6STP1-201ENST00000346911 1020 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VGLL1Q99990 RNU1-87P-201ENST00000363727 170 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 RNA5SP28-201ENST00000363841 119 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 QRSL1P2-201ENST00000418582 964 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.78□□□□□ -1.8
VGLL1Q99990 PTP4A1P1-201ENST00000420539 515 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 E2F6P2-201ENST00000420708 748 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 AC093655.2-201ENST00000425735 631 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 USP9YP11-201ENST00000427537 717 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 BX323845.1-201ENST00000432417 179 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 MTND4P32-201ENST00000437189 1237 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.78□□□□□ -1.8
VGLL1Q99990 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AL691482.1-201ENST00000453255 87 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 AC239798.3-201ENST00000454459 408 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AL445433.1-201ENST00000457507 257 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 USP9YP25-201ENST00000457708 443 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 AC010468.1-201ENST00000461022 817 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.78□□□□□ -1.8
VGLL1Q99990 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 AC090686.1-201ENST00000481577 749 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 AC079203.1-201ENST00000487972 404 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.78□□□□□ -1.8
VGLL1Q99990 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AC091951.3-201ENST00000504093 246 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.78□□□□□ -1.8
VGLL1Q99990 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 MTCO3P28-201ENST00000513351 515 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 AC119751.1-201ENST00000513357 765 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
VGLL1Q99990 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.78□□□□□ -1.8
VGLL1Q99990 IGHV3-63-201ENST00000518422 341 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 OR5AK3P-201ENST00000527486 1297 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.78□□□□□ -1.8
VGLL1Q99990 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AL442163.2-201ENST00000553912 710 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.78□□□□□ -1.8
VGLL1Q99990 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.78□□□□□ -1.8
VGLL1Q99990 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.78□□□□□ -1.8
VGLL1Q99990 MTND4LP24-201ENST00000572277 291 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 MIR3614-201ENST00000581261 86 ntBASIC3.78□□□□□ -1.8
VGLL1Q99990 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VGLL1Q99990 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
VGLL1Q99990 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.78□□□□□ -1.8
VGLL1Q99990 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms