Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SMOQ99835 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 AP005435.3-201ENST00000531260 3198 ntBASIC5.36□□□□□ -1.55
SMOQ99835 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SMOQ99835 FAM3C2-201ENST00000312214 681 ntBASIC5.36□□□□□ -1.55
SMOQ99835 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 RN7SKP113-201ENST00000363891 295 ntBASIC5.36□□□□□ -1.55
SMOQ99835 RNU6-707P-201ENST00000364647 95 ntBASIC5.36□□□□□ -1.55
SMOQ99835 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 RNU5A-2P-201ENST00000384337 116 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AL078599.1-201ENST00000402075 293 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AC092745.2-202ENST00000411880 369 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 AL354766.1-201ENST00000423396 542 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.36□□□□□ -1.55
SMOQ99835 AC234781.2-201ENST00000426370 994 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AL589823.1-201ENST00000429577 183 ntBASIC5.36□□□□□ -1.55
SMOQ99835 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.36□□□□□ -1.55
SMOQ99835 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 DNAJC19P8-201ENST00000452887 259 ntBASIC5.36□□□□□ -1.55
SMOQ99835 MRPL42P4-201ENST00000453267 443 ntBASIC5.36□□□□□ -1.55
SMOQ99835 RPL7P48-201ENST00000461513 746 ntBASIC5.36□□□□□ -1.55
SMOQ99835 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 RN7SL97P-201ENST00000486780 299 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AC104971.1-201ENST00000495117 578 ntBASIC5.36□□□□□ -1.55
SMOQ99835 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.36□□□□□ -1.55
SMOQ99835 AC010350.1-201ENST00000504908 231 ntBASIC5.36□□□□□ -1.55
SMOQ99835 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 COX6B1P5-201ENST00000509843 249 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AC023632.1-201ENST00000518463 375 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.36□□□□□ -1.55
SMOQ99835 OR5AZ1P-201ENST00000527448 943 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 AC092747.2-201ENST00000545069 983 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.36□□□□□ -1.55
SMOQ99835 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.36□□□□□ -1.55
SMOQ99835 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 AC019322.1-201ENST00000571869 389 ntBASIC5.36□□□□□ -1.55
SMOQ99835 MIR4443-201ENST00000585052 53 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AC124312.4-201ENST00000605533 310 ntBASIC5.36□□□□□ -1.55
SMOQ99835 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 AC079248.2-201ENST00000623779 326 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AC010608.2-201ENST00000624830 470 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.36□□□□□ -1.55
SMOQ99835 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SMOQ99835 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.36□□□□□ -1.55
SMOQ99835 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.36□□□□□ -1.55
SMOQ99835 CASC19-221ENST00000641309 1382 ntBASIC5.36□□□□□ -1.55
SMOQ99835 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SMOQ99835 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 AC006484.1-201ENST00000435086 1884 ntBASIC5.36□□□□□ -1.55
SMOQ99835 AL121950.1-201ENST00000624993 2077 ntBASIC5.36□□□□□ -1.55
SMOQ99835 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SMOQ99835 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.36□□□□□ -1.55
SMOQ99835 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMOQ99835 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SMOQ99835 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.36□□□□□ -1.55
SMOQ99835 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMOQ99835 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMOQ99835 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMOQ99835 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMOQ99835 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.35□□□□□ -1.55
SMOQ99835 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMOQ99835 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.35□□□□□ -1.55
SMOQ99835 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.35□□□□□ -1.55
SMOQ99835 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.35□□□□□ -1.55
SMOQ99835 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMOQ99835 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.35□□□□□ -1.55
SMOQ99835 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SMOQ99835 AP005901.5-201ENST00000545779 1796 ntBASIC5.35□□□□□ -1.55
SMOQ99835 NSRP1P1-201ENST00000444067 1693 ntBASIC5.35□□□□□ -1.55
SMOQ99835 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.35□□□□□ -1.55
SMOQ99835 SGO1P2-201ENST00000429458 1589 ntBASIC5.35□□□□□ -1.55
SMOQ99835 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.35□□□□□ -1.55
SMOQ99835 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMOQ99835 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.35□□□□□ -1.55
SMOQ99835 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.35□□□□□ -1.55
SMOQ99835 RN7SKP149-201ENST00000363008 344 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms