Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL133268.1-201ENST00000405676 1401 ntBASIC5.36□□□□□ -1.55
ABCA3Q99758 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ABCA3Q99758 RNA5SP51-201ENST00000364750 119 ntBASIC5.35□□□□□ -1.55
ABCA3Q99758 SNORD3H-201ENST00000384486 214 ntBASIC5.35□□□□□ -1.55
ABCA3Q99758 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.35□□□□□ -1.55
ABCA3Q99758 RPL23AP25-201ENST00000430973 463 ntBASIC5.35□□□□□ -1.55
ABCA3Q99758 RPS3AP46-201ENST00000448352 682 ntBASIC5.35□□□□□ -1.55
ABCA3Q99758 RPS4XP12-201ENST00000461747 709 ntBASIC5.35□□□□□ -1.55
ABCA3Q99758 GMPSP1-201ENST00000514075 579 ntBASIC5.35□□□□□ -1.55
ABCA3Q99758 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.35□□□□□ -1.55
ABCA3Q99758 AL031985.2-201ENST00000600955 480 ntBASIC5.35□□□□□ -1.55
ABCA3Q99758 AC091167.4-201ENST00000605079 184 ntBASIC5.35□□□□□ -1.55
ABCA3Q99758 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.35□□□□□ -1.55
ABCA3Q99758 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ABCA3Q99758 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.35□□□□□ -1.55
ABCA3Q99758 AP004289.2-201ENST00000444413 1457 ntBASIC5.35□□□□□ -1.55
ABCA3Q99758 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCA3Q99758 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCA3Q99758 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
ABCA3Q99758 RNVU1-14-201ENST00000384770 164 ntBASIC5.34□□□□□ -1.55
ABCA3Q99758 GTF3AP5-201ENST00000442645 697 ntBASIC5.34□□□□□ -1.55
ABCA3Q99758 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.34□□□□□ -1.55
ABCA3Q99758 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.34□□□□□ -1.55
ABCA3Q99758 RN7SKP18-201ENST00000516005 275 ntBASIC5.34□□□□□ -1.55
ABCA3Q99758 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.34□□□□□ -1.55
ABCA3Q99758 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.34□□□□□ -1.55
ABCA3Q99758 NPM1P47-201ENST00000560843 856 ntBASIC5.34□□□□□ -1.55
ABCA3Q99758 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.34□□□□□ -1.55
ABCA3Q99758 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.34□□□□□ -1.55
ABCA3Q99758 AC015922.4-201ENST00000612568 690 ntBASIC5.34□□□□□ -1.55
ABCA3Q99758 AL121890.2-201ENST00000617644 465 ntBASIC5.34□□□□□ -1.55
ABCA3Q99758 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCA3Q99758 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ABCA3Q99758 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ABCA3Q99758 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
ABCA3Q99758 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ABCA3Q99758 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
ABCA3Q99758 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.34□□□□□ -1.56
ABCA3Q99758 RNA5SP22-201ENST00000365393 109 ntBASIC5.34□□□□□ -1.56
ABCA3Q99758 AL122016.1-201ENST00000403365 367 ntBASIC5.34□□□□□ -1.56
ABCA3Q99758 OR2AH1P-201ENST00000425717 928 ntBASIC5.34□□□□□ -1.56
ABCA3Q99758 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.34□□□□□ -1.56
ABCA3Q99758 HSPD1P21-201ENST00000436541 245 ntBASIC5.34□□□□□ -1.56
ABCA3Q99758 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ABCA3Q99758 AL133162.1-201ENST00000463228 453 ntBASIC5.34□□□□□ -1.56
ABCA3Q99758 AC106707.2-201ENST00000484182 374 ntBASIC5.34□□□□□ -1.56
ABCA3Q99758 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
ABCA3Q99758 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
ABCA3Q99758 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
ABCA3Q99758 ZNF833P-201ENST00000424938 1494 ntBASIC5.33□□□□□ -1.56
ABCA3Q99758 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
ABCA3Q99758 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.33□□□□□ -1.56
ABCA3Q99758 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ABCA3Q99758 AL022393.1-201ENST00000625142 1677 ntBASIC5.33□□□□□ -1.56
ABCA3Q99758 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ABCA3Q99758 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.33□□□□□ -1.56
ABCA3Q99758 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ABCA3Q99758 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
ABCA3Q99758 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.33□□□□□ -1.56
ABCA3Q99758 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
ABCA3Q99758 CTSL3P-202ENST00000412179 788 ntBASIC5.33□□□□□ -1.56
ABCA3Q99758 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.33□□□□□ -1.56
ABCA3Q99758 MIR8069-1-201ENST00000616627 86 ntBASIC5.33□□□□□ -1.56
ABCA3Q99758 MIR8069-2-201ENST00000621412 86 ntBASIC5.33□□□□□ -1.56
ABCA3Q99758 AP001002.2-201ENST00000625137 386 ntBASIC5.33□□□□□ -1.56
ABCA3Q99758 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.33□□□□□ -1.56
ABCA3Q99758 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ABCA3Q99758 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ABCA3Q99758 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
ABCA3Q99758 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.33□□□□□ -1.56
ABCA3Q99758 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
ABCA3Q99758 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ABCA3Q99758 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
ABCA3Q99758 PEX12P1-201ENST00000400284 1048 ntBASIC5.32□□□□□ -1.56
ABCA3Q99758 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.32□□□□□ -1.56
ABCA3Q99758 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.32□□□□□ -1.56
ABCA3Q99758 AC005726.1-201ENST00000494679 427 ntBASIC5.32□□□□□ -1.56
ABCA3Q99758 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.32□□□□□ -1.56
ABCA3Q99758 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.32□□□□□ -1.56
ABCA3Q99758 AC090151.1-201ENST00000520784 730 ntBASIC5.32□□□□□ -1.56
ABCA3Q99758 AC007458.1-201ENST00000542812 373 ntBASIC5.32□□□□□ -1.56
ABCA3Q99758 AC005000.2-201ENST00000605468 310 ntBASIC5.32□□□□□ -1.56
ABCA3Q99758 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ABCA3Q99758 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ABCA3Q99758 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ABCA3Q99758 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.32□□□□□ -1.56
ABCA3Q99758 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.32□□□□□ -1.56
ABCA3Q99758 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.32□□□□□ -1.56
ABCA3Q99758 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ABCA3Q99758 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ABCA3Q99758 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ABCA3Q99758 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
ABCA3Q99758 OR52E6-202ENST00000379946 954 ntBASIC5.31□□□□□ -1.56
ABCA3Q99758 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.31□□□□□ -1.56
ABCA3Q99758 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.31□□□□□ -1.56
ABCA3Q99758 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.31□□□□□ -1.56
ABCA3Q99758 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.31□□□□□ -1.56
ABCA3Q99758 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.31□□□□□ -1.56
ABCA3Q99758 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.31□□□□□ -1.56
ABCA3Q99758 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms