Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL049830.4-201ENST00000555149 351 ntBASIC4.76□□□□□ -1.65
PKP4Q99569 MIR4716-201ENST00000579628 84 ntBASIC4.76□□□□□ -1.65
PKP4Q99569 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.76□□□□□ -1.65
PKP4Q99569 NIFKP6-201ENST00000598115 845 ntBASIC4.76□□□□□ -1.65
PKP4Q99569 AC234772.3-201ENST00000602277 528 ntBASIC4.76□□□□□ -1.65
PKP4Q99569 AC022022.2-201ENST00000602989 360 ntBASIC4.76□□□□□ -1.65
PKP4Q99569 AC133644.2-201ENST00000608142 540 ntBASIC4.76□□□□□ -1.65
PKP4Q99569 AP001521.2-201ENST00000608772 546 ntBASIC4.76□□□□□ -1.65
PKP4Q99569 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PKP4Q99569 AL353662.3-201ENST00000625131 237 ntBASIC4.76□□□□□ -1.65
PKP4Q99569 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PKP4Q99569 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.76□□□□□ -1.65
PKP4Q99569 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.76□□□□□ -1.65
PKP4Q99569 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PKP4Q99569 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.76□□□□□ -1.65
PKP4Q99569 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.76□□□□□ -1.65
PKP4Q99569 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PKP4Q99569 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
PKP4Q99569 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.76□□□□□ -1.65
PKP4Q99569 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.76□□□□□ -1.65
PKP4Q99569 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.75□□□□□ -1.65
PKP4Q99569 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 MAPK10-349ENST00000641767 3661 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PKP4Q99569 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PKP4Q99569 RNU6-452P-201ENST00000384406 107 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 RNY3P9-201ENST00000384727 106 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PKP4Q99569 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 MTND4P13-201ENST00000402078 1023 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AL589647.1-201ENST00000402485 466 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 RNA5SP345-201ENST00000410646 108 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AC096533.1-201ENST00000411645 353 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AL158050.1-201ENST00000416077 457 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 HIGD1AP15-201ENST00000416198 280 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 OR2AM1P-201ENST00000422137 422 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AC241520.1-201ENST00000422654 1099 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 XKRYP1-201ENST00000423438 492 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 XKRYP2-201ENST00000432915 492 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AL035246.1-201ENST00000433554 1255 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.75□□□□□ -1.65
PKP4Q99569 MTCYBP31-201ENST00000438855 1122 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 GTF3AP5-201ENST00000442645 697 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.75□□□□□ -1.65
PKP4Q99569 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.75□□□□□ -1.65
PKP4Q99569 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.75□□□□□ -1.65
PKP4Q99569 SNORD11.1-201ENST00000459482 85 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AC008379.1-201ENST00000463655 464 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.75□□□□□ -1.65
PKP4Q99569 SUMO2P5-201ENST00000506790 245 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 PGBD4P4-201ENST00000509673 613 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.75□□□□□ -1.65
PKP4Q99569 BTF3P13-201ENST00000513224 490 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 ENPP7P9-201ENST00000514456 627 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.75□□□□□ -1.65
PKP4Q99569 SNORD116-26-201ENST00000516006 96 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.75□□□□□ -1.65
PKP4Q99569 AC010476.1-201ENST00000519111 851 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.75□□□□□ -1.65
PKP4Q99569 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PKP4Q99569 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.75□□□□□ -1.65
PKP4Q99569 NOP56P3-201ENST00000549457 385 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AL049839.1-201ENST00000556151 657 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.75□□□□□ -1.65
PKP4Q99569 CBX3P2-202ENST00000583365 535 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AC011487.3-201ENST00000593607 453 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 VN1R84P-201ENST00000593697 235 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PKP4Q99569 AC020910.3-201ENST00000603701 874 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AC011453.2-201ENST00000603737 729 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
PKP4Q99569 AC090510.2-201ENST00000617465 629 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AC078880.5-201ENST00000617845 421 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AP004607.9-201ENST00000618202 316 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.75□□□□□ -1.65
PKP4Q99569 AC132825.7-201ENST00000638744 335 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 CASC19-204ENST00000641001 2055 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PKP4Q99569 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 IRF5P1-201ENST00000504852 2164 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.75□□□□□ -1.65
PKP4Q99569 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PKP4Q99569 AC000374.1-201ENST00000434698 1745 ntBASIC4.75□□□□□ -1.65
PKP4Q99569 AL034370.1-201ENST00000397254 1590 ntBASIC4.74□□□□□ -1.65
PKP4Q99569 AC022893.2-201ENST00000564832 3296 ntBASIC4.74□□□□□ -1.65
PKP4Q99569 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PKP4Q99569 SNORA62.2-201ENST00000364672 152 ntBASIC4.74□□□□□ -1.65
PKP4Q99569 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.74□□□□□ -1.65
PKP4Q99569 SNORA51.8-201ENST00000384234 132 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms