Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MTND6P12-201ENST00000428247 522 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC023274.2-201ENST00000445264 521 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC023194.2-201ENST00000465398 406 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC007998.1-201ENST00000474156 672 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC090013.1-201ENST00000485147 480 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 RPL35P6-201ENST00000490024 372 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 RN7SL284P-201ENST00000498823 275 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC005741.1-201ENST00000511094 432 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 SNORD46.2-201ENST00000516021 102 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC087360.1-201ENST00000518788 616 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC109635.6-201ENST00000525487 1113 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC005014.2-201ENST00000607795 599 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC127024.6-201ENST00000621598 424 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC112243.1-201ENST00000623949 3851 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
TRIM47Q96LD4 AC013488.1-201ENST00000526618 1838 ntBASIC7.48□□□□□ -1.21
TRIM47Q96LD4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC007485.2-201ENST00000623493 1667 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 TNPO1P2-201ENST00000426249 2665 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC027575.3-201ENST00000583058 2747 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 Y_RNA.31-201ENST00000362574 102 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 Y_RNA.184-201ENST00000363884 108 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 RNU6-1103P-201ENST00000384150 107 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 BX295541.1-201ENST00000417774 250 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC006065.1-201ENST00000422539 802 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 CACYBPP1-201ENST00000438592 684 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 MTATP8P1-201ENST00000467115 207 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC027544.3-201ENST00000535082 757 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC063950.1-201ENST00000552036 308 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 NPIPB1P-202ENST00000588786 828 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AL953862.2-201ENST00000603089 820 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC012507.3-201ENST00000603556 477 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 Z84480.1-201ENST00000605131 311 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC018462.2-201ENST00000605375 395 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AL513218.1-201ENST00000606527 391 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC103710.3-201ENST00000608157 948 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC100810.6-201ENST00000638068 285 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AC100871.1-201ENST00000507871 1456 ntBASIC7.47□□□□□ -1.21
TRIM47Q96LD4 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TRIM47Q96LD4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
TRIM47Q96LD4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.21
TRIM47Q96LD4 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
TRIM47Q96LD4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
TRIM47Q96LD4 AC011592.1-201ENST00000624647 3634 ntBASIC7.46□□□□□ -1.21
TRIM47Q96LD4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
TRIM47Q96LD4 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.46□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms