Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC234782.5-201ENST00000617723 324 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC078880.5-201ENST00000617845 421 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC026124.2-201ENST00000621847 656 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC000123.2-201ENST00000623124 461 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AC020978.9-201ENST00000624380 1141 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 AP000843.1-201ENST00000624880 701 ntBASIC4.63□□□□□ -1.67
VPS33AQ96AX1 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS33AQ96AX1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 RN7SKP160-201ENST00000363804 340 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 RNA5SP28-201ENST00000363841 119 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 MIR525-201ENST00000384978 85 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 U3.25-201ENST00000391209 220 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 ATP5F1P2-201ENST00000398143 760 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 NPM1P4-201ENST00000414095 812 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AF186996.5-201ENST00000418098 904 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC241520.1-201ENST00000422654 1099 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC079807.1-201ENST00000429993 481 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 ARL4AP3-201ENST00000441452 574 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 RPL7P33-201ENST00000444159 742 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 HMGB1P48-201ENST00000446155 598 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL606490.1-201ENST00000452266 765 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 BX248409.1-201ENST00000455497 255 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 SETP20-201ENST00000457046 852 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL049829.1-201ENST00000465411 156 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 RPS17P11-201ENST00000474297 293 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 RPS4XP6-201ENST00000477670 797 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 RPL7P39-201ENST00000481157 744 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC104629.1-201ENST00000494226 508 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 RPS4XP18-201ENST00000495480 763 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL136038.1-201ENST00000497246 351 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC008885.2-201ENST00000509506 930 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 COX6B1P5-201ENST00000509843 249 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 RNA5SP392-201ENST00000516905 112 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 OR7E128P-201ENST00000532736 1024 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL442163.2-201ENST00000553912 710 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL049839.1-201ENST00000556151 657 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC126915.2-201ENST00000610957 190 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL592494.2-201ENST00000425455 1548 ntBASIC4.62□□□□□ -1.67
VPS33AQ96AX1 AL445487.1-201ENST00000415694 1580 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 AC091046.3-201ENST00000631455 1574 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS33AQ96AX1 OR10J6P-201ENST00000289731 930 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 OR4K17-201ENST00000315543 1032 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 RN7SKP162-201ENST00000363605 345 ntBASIC4.61□□□□□ -1.67
VPS33AQ96AX1 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms