Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTP4A1Q93096 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTP4A1Q93096 MIR153-1-201ENST00000384914 90 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 ATP5F1P6-201ENST00000402768 767 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AL592291.1-201ENST00000403830 352 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AP000580.1-201ENST00000404439 358 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AL160275.2-201ENST00000412010 394 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 GTF3AP1-201ENST00000416942 1004 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 RGS17P1-201ENST00000423358 553 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AL390879.2-203ENST00000426943 1121 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC092162.1-201ENST00000432828 434 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 NMNAT1P2-201ENST00000435192 860 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 CNOT7P2-201ENST00000441051 832 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AL163193.1-201ENST00000444895 788 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AL354714.3-201ENST00000447284 493 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 FAR2P1-206ENST00000449736 709 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC092647.2-201ENST00000452998 253 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC008280.2-201ENST00000455473 307 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC097484.1-201ENST00000471148 389 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC126121.1-201ENST00000482313 553 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 UBA52P7-201ENST00000486088 380 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 DEFB109F-201ENST00000491870 277 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 TPT1P3-201ENST00000492841 512 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 ECM1P2-201ENST00000503354 1577 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 HIGD1AP14-201ENST00000507617 282 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 RN7SKP260-201ENST00000516907 149 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AP003049.1-201ENST00000529418 457 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC124068.1-201ENST00000563131 678 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC011447.4-201ENST00000587562 111 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 RPL26P30-202ENST00000602923 645 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC105254.2-201ENST00000603636 436 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AC087783.2-201ENST00000605070 562 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 IMMP1LP1-201ENST00000605170 488 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AL672167.1-205ENST00000641112 3080 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTP4A1Q93096 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTP4A1Q93096 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTP4A1Q93096 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTP4A1Q93096 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTP4A1Q93096 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTP4A1Q93096 CR788268.1-201ENST00000603931 1809 ntBASIC4.42□□□□□ -1.7
PTP4A1Q93096 AL590763.1-201ENST00000398297 1545 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 MTCO1P6-201ENST00000481192 1384 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 DHX9P1-201ENST00000436565 3076 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 AC018529.3-201ENST00000624212 2254 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 RNU6-356P-201ENST00000384140 107 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 U3.36-201ENST00000408418 213 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 AC005033.1-201ENST00000428904 813 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 FABP7P2-201ENST00000429946 379 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 RPL21P110-201ENST00000433345 446 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 MRPL48P1-201ENST00000445390 636 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTP4A1Q93096 DNAJC19P8-201ENST00000452887 259 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 BX248409.1-201ENST00000455497 255 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 AC018638.3-201ENST00000461273 132 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 RPS18P6-201ENST00000476880 458 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 AC073522.1-201ENST00000483312 377 ntBASIC4.41□□□□□ -1.7
PTP4A1Q93096 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.41□□□□□ -1.7
PTP4A1Q93096 RNA5SP497-201ENST00000516081 97 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms