Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RPL21P71-201ENST00000465598 459 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 RPS26P28-201ENST00000470806 348 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 RN7SL826P-201ENST00000479724 288 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 RPL32P9-201ENST00000487963 407 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 KATNBL1P4-201ENST00000503545 918 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 PPBPP1-201ENST00000510807 373 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 RNU4-18P-201ENST00000516751 149 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 RPL23AP97-201ENST00000568955 471 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AC010857.1-201ENST00000606398 594 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AC012213.4-201ENST00000606457 354 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 AL021707.7-201ENST00000607991 416 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 MFSD8-220ENST00000641243 1422 ntBASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.2□□□□□ -1.74
CLHC1Q8NHS4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AC010300.1-201ENST00000600671 5134 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 RNA5SP87-201ENST00000384155 118 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 SDHCP2-201ENST00000398565 501 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 GLULP6-201ENST00000399502 913 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 PRELID3BP10-201ENST00000431957 584 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AC005229.2-201ENST00000456995 399 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AC010326.1-201ENST00000462726 602 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 MIR4270-201ENST00000581799 70 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AC025946.2-201ENST00000603398 234 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AL121873.1-201ENST00000616013 524 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AL645927.2-201ENST00000618350 349 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 MIR6891-201ENST00000618788 93 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 MIR6730-201ENST00000622213 67 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 AL049536.1-201ENST00000625043 744 ntBASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLHC1Q8NHS4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AC125257.1-201ENST00000560400 2930 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 RNU1-130P-201ENST00000363930 160 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 U3.15-201ENST00000365398 212 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AC097374.1-203ENST00000400783 485 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 UBTFL3-201ENST00000418934 1024 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 FTH1P16-201ENST00000435241 552 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 HLA-N-201ENST00000437516 135 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 RPL7P33-201ENST00000444159 742 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 OR6C72P-201ENST00000451403 892 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 RPL35AP28-201ENST00000459730 331 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 RPL35AP15-201ENST00000468042 339 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 RPL21P126-201ENST00000470049 478 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 OR52A4P-201ENST00000472867 958 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 UBTFL6-201ENST00000477929 1024 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 RPS6P4-201ENST00000494693 758 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AC092045.1-201ENST00000495716 1231 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AC025445.1-201ENST00000502728 300 ntBASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLHC1Q8NHS4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms