Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 RNU4-91P-201ENST00000364778 135 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 SNORA11C-201ENST00000408532 129 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 RNA5SP296-201ENST00000410523 111 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AL121878.1-201ENST00000418638 859 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 CRIP1P1-201ENST00000427567 185 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 RPL23AP4-201ENST00000427757 463 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AC079807.1-201ENST00000429993 481 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 RPS25P9-201ENST00000435591 252 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 RNA5SP269-201ENST00000459032 137 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 ARL2BPP4-201ENST00000506854 471 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AP000859.1-201ENST00000525536 307 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AP003392.2-201ENST00000527269 208 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AC074029.1-201ENST00000552531 1044 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 ZNF322P1-201ENST00000568013 1209 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 OR4G1P-201ENST00000588632 938 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AP003973.1-201ENST00000604639 691 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AL133481.2-203ENST00000607558 139 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AC012360.2-201ENST00000609349 391 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 RNA5SP439-201ENST00000617595 124 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AC012414.7-202ENST00000622705 1090 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AC004520.1-201ENST00000608362 1413 ntBASIC5.05□□□□□ -1.6
CPEB3Q8NE35 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CPEB3Q8NE35 AC011933.2-201ENST00000578539 2790 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 MIR16-1-201ENST00000385271 89 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 CYCSP45-201ENST00000402289 315 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 RNA5SP498-201ENST00000411342 120 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AL513325.1-201ENST00000417716 1034 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 DPPA2P1-201ENST00000428060 556 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 RPL12P39-201ENST00000455456 496 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC138853.1-201ENST00000503549 823 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC139365.2-201ENST00000517972 253 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 HMGN2P36-201ENST00000529541 409 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 OR4A43P-201ENST00000532938 908 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AL390334.1-201ENST00000556395 450 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC092121.1-201ENST00000569452 202 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AL163952.1-202ENST00000569625 600 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 SS18L2P2-201ENST00000583960 235 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AL513327.3-201ENST00000602618 469 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AL109618.2-201ENST00000605527 211 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC016769.4-201ENST00000616893 535 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC073348.1-201ENST00000623002 331 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC138965.3-201ENST00000623875 498 ntBASIC5.04□□□□□ -1.6
CPEB3Q8NE35 AC016717.3-201ENST00000624730 554 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms