Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 MTCO1P14-201ENST00000441695 1559 ntBASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
CCDC71LQ8N9Z2 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 RNA5SP52-201ENST00000362448 134 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 SNORA74A-201ENST00000364089 198 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 SNORD51.1-201ENST00000365405 77 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 MIR1286-201ENST00000408112 78 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 SNORA11.3-201ENST00000408471 128 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 MIR1282-201ENST00000408865 101 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AL357078.2-201ENST00000416486 427 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 CYP4F29P-201ENST00000420685 446 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AL390879.2-203ENST00000426943 1121 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AL121776.1-201ENST00000429337 372 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 MTCYBP21-201ENST00000443300 1113 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AL606490.1-201ENST00000452266 765 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 RPL5P32-201ENST00000454085 879 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 ISCUP1-201ENST00000454451 448 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC010469.1-201ENST00000463864 576 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC108729.2-201ENST00000476543 840 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 RPS18P6-201ENST00000476880 458 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 MRPS33P2-201ENST00000507850 322 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 PARP4P3-201ENST00000510265 317 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC108120.2-201ENST00000512973 294 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC004980.4-201ENST00000513375 203 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 IGLVIV-64-201ENST00000518581 301 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 IGLVIV-53-201ENST00000520107 367 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 IFITM8P-201ENST00000522529 394 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 OR5M7P-201ENST00000526140 972 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC022832.1-201ENST00000530718 645 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 VN1R84P-201ENST00000593697 235 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 SUMO2P14-201ENST00000604488 293 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC025175.1-201ENST00000606482 759 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AP002360.3-201ENST00000607673 710 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC025016.1-201ENST00000616746 682 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC016957.2-201ENST00000616998 848 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 SNORA11.6-201ENST00000619030 128 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 NXPH1-205ENST00000602349 1953 ntBASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC71LQ8N9Z2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
CCDC71LQ8N9Z2 MFSD8-242ENST00000641690 4199 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC024341.1-201ENST00000526444 1552 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 AC007685.1-201ENST00000329806 452 ntBASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC71LQ8N9Z2 U3.15-201ENST00000365398 212 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms