Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AP005205.1-201ENST00000563503 508 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AC138915.2-201ENST00000569776 97 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 MIR548S-201ENST00000581352 82 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 TEX21P-201ENST00000447107 1476 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 MTCO1P23-201ENST00000415223 1526 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC103591.2-201ENST00000265259 766 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 RPL21P132-201ENST00000331267 462 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 RNU6-259P-201ENST00000383999 107 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 MTCYBP36-201ENST00000404146 440 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 MIR1284-201ENST00000408337 120 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AL450992.3-201ENST00000413192 568 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 RPL21P108-201ENST00000413857 481 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC007559.1-201ENST00000428736 355 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC092809.1-201ENST00000441469 474 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 RPL38P3-201ENST00000484463 213 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AL035690.1-201ENST00000490892 383 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC008802.1-201ENST00000519121 791 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AP001189.2-201ENST00000527320 189 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 MED28P5-201ENST00000528254 438 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 CR383656.6-201ENST00000550518 394 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 IGBP1P1-201ENST00000554337 1009 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 RPS3AP4-201ENST00000555161 764 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC092325.1-201ENST00000566449 554 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 MIR4528-201ENST00000577763 90 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC022884.3-201ENST00000579571 248 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC011445.2-201ENST00000599274 173 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC119501.1-201ENST00000603646 475 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC107214.2-201ENST00000608204 634 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 RN7SL787P-201ENST00000613000 284 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC005332.6-201ENST00000613178 446 ntBASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TRIM48Q8IWZ4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 AC130304.1-201ENST00000622942 2385 ntBASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
TRIM48Q8IWZ4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms