Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 HMGB3P31-201ENST00000413333 595 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 GTF2IP5-201ENST00000414608 731 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AL358176.3-201ENST00000420757 454 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 MTCO2P1-201ENST00000424648 477 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AC093414.1-201ENST00000434712 514 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AP000949.1-201ENST00000438328 629 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AC006967.1-201ENST00000467608 589 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 OR52A4P-201ENST00000472867 958 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 CYCSP20-201ENST00000473154 315 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AC020890.1-201ENST00000491837 504 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 IGKV1-32-201ENST00000519290 311 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 CR383656.14-201ENST00000551951 406 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AC087477.6-201ENST00000559595 843 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AC027104.1-201ENST00000563702 681 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 MIR4716-201ENST00000579628 84 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AC233702.9-201ENST00000581528 203 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 RNF138P2-201ENST00000603490 592 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 IMMP1LP1-201ENST00000605170 488 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AL391358.1-201ENST00000605342 190 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AC006946.3-201ENST00000609791 756 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 STMN1P1-201ENST00000617809 440 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AC019206.1-201ENST00000621938 425 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AC024595.1-201ENST00000623088 387 ntBASIC4.96□□□□□ -1.62
PRPF39Q86UA1 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.96□□□□□ -1.62
PRPF39Q86UA1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 SAMMSON-226ENST00000642089 1582 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC017007.4-201ENST00000503353 1352 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 SNORD56.4-201ENST00000363883 71 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 RNVU1-6-201ENST00000364688 164 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC019155.1-201ENST00000382242 574 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 RNU6-481P-201ENST00000384194 107 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AL592291.1-201ENST00000403830 352 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AL445183.3-201ENST00000414168 502 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AL807761.1-201ENST00000417622 171 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 RPS29P33-201ENST00000456717 146 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 RPL32P14-201ENST00000463196 378 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC104108.1-201ENST00000509930 412 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 HMGB1P23-201ENST00000518743 568 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 COX6B1P6-201ENST00000522347 255 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 SOX5P1-201ENST00000524155 1127 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 MORF4L1P3-201ENST00000525966 950 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC011477.5-201ENST00000586571 259 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AP003117.1-201ENST00000602771 554 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AL512782.1-201ENST00000603093 364 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC020910.3-201ENST00000603701 874 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 BNIP3P19-201ENST00000605397 577 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC010424.2-201ENST00000607594 443 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC120053.1-201ENST00000607706 736 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 MAPK10-304ENST00000641341 3984 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 MTCO1P4-201ENST00000520516 1409 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 SEC63P2-201ENST00000503863 1939 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC104118.1-201ENST00000607625 1589 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF39Q86UA1 DDX18P5-201ENST00000534547 1306 ntBASIC4.95□□□□□ -1.62
PRPF39Q86UA1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PRPF39Q86UA1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms