Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LRRK2Q5S007 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 ATP5A1P2-201ENST00000412323 255 ntBASIC3.61□□□□□ -1.83
LRRK2Q5S007 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRK2Q5S007 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRK2Q5S007 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LRRK2Q5S007 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRK2Q5S007 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 OSBPL9P1-201ENST00000604744 1469 ntBASIC3.61□□□□□ -1.83
LRRK2Q5S007 ADAM5-202ENST00000399789 1942 ntBASIC3.61□□□□□ -1.83
LRRK2Q5S007 AC009229.4-201ENST00000623854 1947 ntBASIC3.61□□□□□ -1.83
LRRK2Q5S007 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LRRK2Q5S007 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRK2Q5S007 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRK2Q5S007 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LRRK2Q5S007 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.61□□□□□ -1.83
LRRK2Q5S007 AL158156.1-201ENST00000422509 473 ntBASIC3.61□□□□□ -1.83
LRRK2Q5S007 CKS1BP6-201ENST00000424932 240 ntBASIC3.61□□□□□ -1.83
LRRK2Q5S007 AL049873.1-201ENST00000480540 376 ntBASIC3.61□□□□□ -1.83
LRRK2Q5S007 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 FTH1P24-201ENST00000503502 462 ntBASIC3.61□□□□□ -1.83
LRRK2Q5S007 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRK2Q5S007 Z98200.1-201ENST00000607298 470 ntBASIC3.61□□□□□ -1.83
LRRK2Q5S007 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRK2Q5S007 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
LRRK2Q5S007 AL442128.2-201ENST00000620246 1824 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRRK2Q5S007 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRK2Q5S007 WAC-209ENST00000428935 1320 ntTSL 2 BASIC3.6□□□□□ -1.83
LRRK2Q5S007 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LRRK2Q5S007 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRK2Q5S007 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 AC062016.2-201ENST00000420950 676 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 CYCSP4-201ENST00000429682 331 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 AC006064.5-201ENST00000541782 248 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRK2Q5S007 FKBP1BP1-201ENST00000553366 325 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRK2Q5S007 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.6□□□□□ -1.83
LRRK2Q5S007 MIR6868-201ENST00000611215 58 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 AC243654.2-201ENST00000612843 443 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRK2Q5S007 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRK2Q5S007 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRK2Q5S007 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.6□□□□□ -1.83
LRRK2Q5S007 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
LRRK2Q5S007 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.6□□□□□ -1.83
LRRK2Q5S007 BTF3P6-201ENST00000448054 499 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 APOOP2-201ENST00000461561 539 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 YPEL5P3-201ENST00000547227 352 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.6□□□□□ -1.83
LRRK2Q5S007 AC010680.3-201ENST00000604215 520 ntBASIC3.6□□□□□ -1.83
LRRK2Q5S007 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
LRRK2Q5S007 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
LRRK2Q5S007 AC116096.1-201ENST00000566804 2314 ntBASIC3.59□□□□□ -1.83
LRRK2Q5S007 AC021242.1-201ENST00000507315 2035 ntBASIC3.59□□□□□ -1.83
LRRK2Q5S007 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRK2Q5S007 AC022417.1-201ENST00000624768 1303 ntBASIC3.59□□□□□ -1.83
LRRK2Q5S007 OR11H4-201ENST00000315409 1082 ntBASIC3.59□□□□□ -1.83
LRRK2Q5S007 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
LRRK2Q5S007 RNU2-65P-201ENST00000410162 185 ntBASIC3.59□□□□□ -1.83
LRRK2Q5S007 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.59□□□□□ -1.83
LRRK2Q5S007 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRK2Q5S007 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LRRK2Q5S007 RN7SKP141-201ENST00000516167 338 ntBASIC3.59□□□□□ -1.83
LRRK2Q5S007 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRK2Q5S007 AC006504.3-201ENST00000586818 523 ntBASIC3.59□□□□□ -1.83
LRRK2Q5S007 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRK2Q5S007 AL137843.1-201ENST00000605078 385 ntBASIC3.59□□□□□ -1.83
LRRK2Q5S007 AC107294.1-201ENST00000609524 467 ntBASIC3.59□□□□□ -1.83
LRRK2Q5S007 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LRRK2Q5S007 AC092111.2-201ENST00000611627 1414 ntBASIC3.59□□□□□ -1.84
LRRK2Q5S007 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.84
LRRK2Q5S007 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LRRK2Q5S007 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.59□□□□□ -1.84
LRRK2Q5S007 MAPK10-320ENST00000641462 6696 ntBASIC3.59□□□□□ -1.84
LRRK2Q5S007 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
LRRK2Q5S007 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
LRRK2Q5S007 EIF1P3-201ENST00000423841 334 ntBASIC3.59□□□□□ -1.84
LRRK2Q5S007 MTND2P40-201ENST00000436718 841 ntBASIC3.59□□□□□ -1.84
LRRK2Q5S007 CYCSP53-201ENST00000455540 265 ntBASIC3.59□□□□□ -1.84
LRRK2Q5S007 AC012158.1-204ENST00000483430 465 ntBASIC3.59□□□□□ -1.84
LRRK2Q5S007 AC069306.1-201ENST00000507006 843 ntBASIC3.59□□□□□ -1.84
LRRK2Q5S007 AC010486.1-201ENST00000511793 424 ntBASIC3.59□□□□□ -1.84
LRRK2Q5S007 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.59□□□□□ -1.84
LRRK2Q5S007 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.59□□□□□ -1.84
LRRK2Q5S007 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC3.59□□□□□ -1.84
LRRK2Q5S007 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.59□□□□□ -1.84
LRRK2Q5S007 AC093388.1-201ENST00000609166 430 ntBASIC3.59□□□□□ -1.84
LRRK2Q5S007 AC110801.1-201ENST00000623590 212 ntBASIC3.59□□□□□ -1.84
LRRK2Q5S007 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LRRK2Q5S007 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
LRRK2Q5S007 ALB-202ENST00000401494 1659 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRK2Q5S007 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
LRRK2Q5S007 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRK2Q5S007 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms