Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 OR51A3P-201ENST00000413596 924 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 AL158073.1-201ENST00000426848 1104 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 FAM96AP1-201ENST00000430879 482 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 USP9YP24-201ENST00000434374 697 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 RPL7AP61-201ENST00000443410 636 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 USP9YP17-201ENST00000444617 696 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 BTF3P6-201ENST00000448054 499 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 NPM1P13-201ENST00000452663 865 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 CYCSP34-201ENST00000458172 304 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 CCDC75P1-201ENST00000469247 791 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AC069528.1-202ENST00000482888 637 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 RPS27P23-201ENST00000487608 251 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 RN7SL447P-201ENST00000494711 245 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AC113430.1-201ENST00000506872 718 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 RNA5SP360-201ENST00000516555 118 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC38Q502W7 AC087283.1-201ENST00000604029 1074 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AP000238.1-201ENST00000608759 426 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 AC079395.2-201ENST00000610982 737 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 OR1S1-201ENST00000624470 978 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC38Q502W7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC38Q502W7 AL672167.1-205ENST00000641112 3080 ntBASIC5.28□□□□□ -1.56
CCDC38Q502W7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC38Q502W7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC38Q502W7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CCDC38Q502W7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC38Q502W7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC38Q502W7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC38Q502W7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC38Q502W7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC38Q502W7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AL035079.1-201ENST00000405210 287 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AC019050.1-201ENST00000418508 492 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AL031736.2-201ENST00000426573 787 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 RPL12P28-201ENST00000430852 489 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 RPL35AP21-201ENST00000437667 333 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC38Q502W7 RPS11P7-201ENST00000442125 465 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 MTND6P6-201ENST00000478031 263 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AL136038.1-201ENST00000497246 351 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 AC105031.1-201ENST00000518550 476 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 MIR4666A-201ENST00000580160 79 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AC106052.1-201ENST00000608029 497 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 AP004247.3-201ENST00000608682 624 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 AC097505.1-201ENST00000610199 565 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 MIR6826-201ENST00000617808 98 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 MIR6886-201ENST00000619864 61 ntBASIC5.27□□□□□ -1.57
CCDC38Q502W7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC38Q502W7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 OR14L1P-202ENST00000641545 3009 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC38Q502W7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC38Q502W7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC38Q502W7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC38Q502W7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC38Q502W7 AC139713.2-215ENST00000641428 5037 ntBASIC5.26□□□□□ -1.57
CCDC38Q502W7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC38Q502W7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CCDC38Q502W7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms