Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 LINC00622-201ENST00000562811 1570 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 RNA5SP322-201ENST00000363617 119 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 OR13C3-201ENST00000374781 1108 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 RNU1-89P-201ENST00000384592 164 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 MIR323B-201ENST00000385269 82 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 RN7SKP167-201ENST00000411047 285 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 MTND4LP21-201ENST00000415303 295 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AL138785.1-201ENST00000425821 331 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AC022022.1-201ENST00000430304 178 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 PRELID3BP10-201ENST00000431957 584 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 VN1R54P-201ENST00000435210 1049 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AC092013.1-201ENST00000438795 332 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 RPL12P3-201ENST00000440080 396 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 HMGB3P21-201ENST00000452483 547 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 NIPA2P2-201ENST00000496376 1083 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 PHBP17-201ENST00000528576 541 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 OR5M2P-201ENST00000529003 936 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 RPL23AP97-201ENST00000568955 471 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AC141257.3-201ENST00000572906 215 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AC090181.2-201ENST00000602975 672 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AL133243.1-201ENST00000614487 366 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 AC006065.6-201ENST00000625201 545 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 CPHL1P-201ENST00000461341 3407 ntBASIC3.34□□□□□ -1.87
HIST1H1AQ02539 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HIST1H1AQ02539 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
HIST1H1AQ02539 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HIST1H1AQ02539 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
HIST1H1AQ02539 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HIST1H1AQ02539 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.34□□□□□ -1.88
HIST1H1AQ02539 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.34□□□□□ -1.88
HIST1H1AQ02539 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.34□□□□□ -1.88
HIST1H1AQ02539 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 RNA5SP306-201ENST00000411087 107 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 SNRPFP1-201ENST00000414761 252 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 NPM1P26-201ENST00000426339 738 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 NDUFA5P1-201ENST00000433858 341 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 HMGB3P22-202ENST00000451823 572 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC092324.1-201ENST00000468671 324 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 RPL12P20-201ENST00000475538 479 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 FTH1P9-201ENST00000513251 355 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC090953.1-201ENST00000604305 1092 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC010200.2-201ENST00000605098 235 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AL713922.2-201ENST00000619384 716 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 MIR6719-201ENST00000622428 87 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC021106.3-201ENST00000623925 531 ntBASIC3.33□□□□□ -1.88
HIST1H1AQ02539 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HIST1H1AQ02539 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms