Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.65□□□□□ -1.66
TPM4P67936 MIR331-201ENST00000362302 94 ntBASIC4.65□□□□□ -1.67
TPM4P67936 SNORA37-201ENST00000384504 129 ntBASIC4.65□□□□□ -1.67
TPM4P67936 GTF3AP1-201ENST00000416942 1004 ntBASIC4.65□□□□□ -1.67
TPM4P67936 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.65□□□□□ -1.67
TPM4P67936 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.65□□□□□ -1.67
TPM4P67936 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.65□□□□□ -1.67
TPM4P67936 VN1R25P-201ENST00000443385 738 ntBASIC4.65□□□□□ -1.67
TPM4P67936 YWHAQP9-201ENST00000445891 512 ntBASIC4.65□□□□□ -1.67
TPM4P67936 PPIAP20-201ENST00000449839 135 ntBASIC4.65□□□□□ -1.67
TPM4P67936 VN1R40P-201ENST00000455196 941 ntBASIC4.65□□□□□ -1.67
TPM4P67936 RPS3AP41-201ENST00000462701 778 ntBASIC4.65□□□□□ -1.67
TPM4P67936 RPL21P126-201ENST00000470049 478 ntBASIC4.65□□□□□ -1.67
TPM4P67936 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
TPM4P67936 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TPM4P67936 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.65□□□□□ -1.67
TPM4P67936 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.65□□□□□ -1.67
TPM4P67936 VTA1P2-201ENST00000520205 911 ntBASIC4.65□□□□□ -1.67
TPM4P67936 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.65□□□□□ -1.67
TPM4P67936 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.65□□□□□ -1.67
TPM4P67936 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.65□□□□□ -1.67
TPM4P67936 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.65□□□□□ -1.67
TPM4P67936 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.65□□□□□ -1.67
TPM4P67936 AC113403.1-201ENST00000604910 193 ntBASIC4.65□□□□□ -1.67
TPM4P67936 AC095038.2-201ENST00000621464 1070 ntBASIC4.65□□□□□ -1.67
TPM4P67936 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.65□□□□□ -1.67
TPM4P67936 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TPM4P67936 AP000756.2-201ENST00000624168 2567 ntBASIC4.65□□□□□ -1.67
TPM4P67936 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TPM4P67936 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.65□□□□□ -1.67
TPM4P67936 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TPM4P67936 AC010329.2-201ENST00000595195 2737 ntBASIC4.65□□□□□ -1.67
TPM4P67936 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.65□□□□□ -1.67
TPM4P67936 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TPM4P67936 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TPM4P67936 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TPM4P67936 AC090017.1-201ENST00000548612 1779 ntBASIC4.64□□□□□ -1.67
TPM4P67936 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TPM4P67936 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TPM4P67936 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.64□□□□□ -1.67
TPM4P67936 AL139095.3-201ENST00000419672 1203 ntBASIC4.64□□□□□ -1.67
TPM4P67936 MTCO1P54-201ENST00000430139 712 ntBASIC4.64□□□□□ -1.67
TPM4P67936 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.64□□□□□ -1.67
TPM4P67936 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.64□□□□□ -1.67
TPM4P67936 RPL12P46-201ENST00000436610 195 ntBASIC4.64□□□□□ -1.67
TPM4P67936 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TPM4P67936 CEACAMP6-201ENST00000452007 574 ntBASIC4.64□□□□□ -1.67
TPM4P67936 HIGD1AP8-201ENST00000453927 274 ntBASIC4.64□□□□□ -1.67
TPM4P67936 RPS3AP53-201ENST00000454716 778 ntBASIC4.64□□□□□ -1.67
TPM4P67936 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.64□□□□□ -1.67
TPM4P67936 AC018797.3-201ENST00000513388 1241 ntBASIC4.64□□□□□ -1.67
TPM4P67936 RNA5SP73-201ENST00000516744 108 ntBASIC4.64□□□□□ -1.67
TPM4P67936 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.64□□□□□ -1.67
TPM4P67936 AC090819.1-201ENST00000523800 1111 ntBASIC4.64□□□□□ -1.67
TPM4P67936 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TPM4P67936 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.64□□□□□ -1.67
TPM4P67936 GNRHR2P1-201ENST00000555315 631 ntBASIC4.64□□□□□ -1.67
TPM4P67936 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.64□□□□□ -1.67
TPM4P67936 RN7SL690P-201ENST00000582087 240 ntBASIC4.64□□□□□ -1.67
TPM4P67936 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.64□□□□□ -1.67
TPM4P67936 AC008782.1-201ENST00000603386 430 ntBASIC4.64□□□□□ -1.67
TPM4P67936 AL445222.1-201ENST00000607259 628 ntBASIC4.64□□□□□ -1.67
TPM4P67936 MIR486-1-201ENST00000612171 68 ntBASIC4.64□□□□□ -1.67
TPM4P67936 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.64□□□□□ -1.67
TPM4P67936 AL356274.1-201ENST00000617064 410 ntBASIC4.64□□□□□ -1.67
TPM4P67936 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.64□□□□□ -1.67
TPM4P67936 AL773545.4-201ENST00000637262 310 ntBASIC4.64□□□□□ -1.67
TPM4P67936 AC008013.2-202ENST00000637965 364 ntBASIC4.64□□□□□ -1.67
TPM4P67936 AL513478.4-201ENST00000641636 310 ntBASIC4.64□□□□□ -1.67
TPM4P67936 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
TPM4P67936 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TPM4P67936 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.64□□□□□ -1.67
TPM4P67936 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TPM4P67936 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
TPM4P67936 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.64□□□□□ -1.67
TPM4P67936 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TPM4P67936 AC093311.1-201ENST00000506586 2021 ntBASIC4.63□□□□□ -1.67
TPM4P67936 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.63□□□□□ -1.67
TPM4P67936 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TPM4P67936 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.63□□□□□ -1.67
TPM4P67936 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.63□□□□□ -1.67
TPM4P67936 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TPM4P67936 MARK2P15-201ENST00000432204 2186 ntBASIC4.63□□□□□ -1.67
TPM4P67936 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.63□□□□□ -1.67
TPM4P67936 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TPM4P67936 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TPM4P67936 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TPM4P67936 HSPD1P16-201ENST00000402302 394 ntBASIC4.63□□□□□ -1.67
TPM4P67936 TMSB10P2-201ENST00000416049 131 ntBASIC4.63□□□□□ -1.67
TPM4P67936 USP12PY-201ENST00000427677 1064 ntBASIC4.63□□□□□ -1.67
TPM4P67936 VDAC1P6-201ENST00000430062 855 ntBASIC4.63□□□□□ -1.67
TPM4P67936 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.63□□□□□ -1.67
TPM4P67936 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.63□□□□□ -1.67
TPM4P67936 EEF1A1P1-201ENST00000447052 739 ntBASIC4.63□□□□□ -1.67
TPM4P67936 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.63□□□□□ -1.67
TPM4P67936 AL162388.1-201ENST00000450912 352 ntBASIC4.63□□□□□ -1.67
TPM4P67936 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.63□□□□□ -1.67
TPM4P67936 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.63□□□□□ -1.67
TPM4P67936 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.63□□□□□ -1.67
TPM4P67936 NARSP2-201ENST00000518524 679 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms