Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RPS20P4-201ENST00000461659 355 ntBASIC2.76□□□□□ -1.97
RPL39P62891 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
RPL39P62891 TRBV12-2-201ENST00000489763 344 ntBASIC2.76□□□□□ -1.97
RPL39P62891 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC2.76□□□□□ -1.97
RPL39P62891 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC2.76□□□□□ -1.97
RPL39P62891 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.76□□□□□ -1.97
RPL39P62891 AC112184.1-201ENST00000505179 312 ntBASIC2.76□□□□□ -1.97
RPL39P62891 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC2.76□□□□□ -1.97
RPL39P62891 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC2.76□□□□□ -1.97
RPL39P62891 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC2.76□□□□□ -1.97
RPL39P62891 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC2.76□□□□□ -1.97
RPL39P62891 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC2.76□□□□□ -1.97
RPL39P62891 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC2.76□□□□□ -1.97
RPL39P62891 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC2.76□□□□□ -1.97
RPL39P62891 AL161729.3-201ENST00000603533 673 ntBASIC2.76□□□□□ -1.97
RPL39P62891 FAM25E-202ENST00000608562 189 ntBASIC2.76□□□□□ -1.97
RPL39P62891 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC2.76□□□□□ -1.97
RPL39P62891 AL035461.2-201ENST00000619201 524 ntBASIC2.76□□□□□ -1.97
RPL39P62891 MIR6886-201ENST00000619864 61 ntBASIC2.76□□□□□ -1.97
RPL39P62891 AL139089.1-201ENST00000620372 975 ntBASIC2.76□□□□□ -1.97
RPL39P62891 OR5BE1P-202ENST00000641168 1176 ntBASIC2.76□□□□□ -1.97
RPL39P62891 OR6C71P-202ENST00000641886 1107 ntBASIC2.76□□□□□ -1.97
RPL39P62891 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
RPL39P62891 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.76□□□□□ -1.97
RPL39P62891 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.76□□□□□ -1.97
RPL39P62891 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC2.76□□□□□ -1.97
RPL39P62891 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RPL39P62891 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.75□□□□□ -1.97
RPL39P62891 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPL39P62891 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPL39P62891 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
RPL39P62891 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
RPL39P62891 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPL39P62891 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPL39P62891 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPL39P62891 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPL39P62891 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RPL39P62891 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPL39P62891 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.75□□□□□ -1.97
RPL39P62891 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RPL39P62891 MIR129-1-201ENST00000384972 72 ntBASIC2.75□□□□□ -1.97
RPL39P62891 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RPL39P62891 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC2.75□□□□□ -1.97
RPL39P62891 OR6K4P-201ENST00000423179 955 ntBASIC2.75□□□□□ -1.97
RPL39P62891 RPL23AP1-201ENST00000428990 471 ntBASIC2.75□□□□□ -1.97
RPL39P62891 VN1R54P-201ENST00000435210 1049 ntBASIC2.75□□□□□ -1.97
RPL39P62891 SKP1P1-201ENST00000438081 489 ntBASIC2.75□□□□□ -1.97
RPL39P62891 PTMAP6-201ENST00000439110 327 ntBASIC2.75□□□□□ -1.97
RPL39P62891 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC2.75□□□□□ -1.97
RPL39P62891 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC2.75□□□□□ -1.97
RPL39P62891 SEPT7P3-201ENST00000455017 621 ntBASIC2.75□□□□□ -1.97
RPL39P62891 RPL7AP10-201ENST00000481016 791 ntBASIC2.75□□□□□ -1.97
RPL39P62891 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.75□□□□□ -1.97
RPL39P62891 AC105233.1-201ENST00000498840 781 ntBASIC2.75□□□□□ -1.97
RPL39P62891 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.75□□□□□ -1.97
RPL39P62891 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC2.75□□□□□ -1.97
RPL39P62891 IGBP1P5-201ENST00000507524 1000 ntBASIC2.75□□□□□ -1.97
RPL39P62891 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC2.75□□□□□ -1.97
RPL39P62891 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.75□□□□□ -1.97
RPL39P62891 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.75□□□□□ -1.97
RPL39P62891 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC2.75□□□□□ -1.97
RPL39P62891 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.75□□□□□ -1.97
RPL39P62891 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC2.75□□□□□ -1.97
RPL39P62891 AC093765.1-201ENST00000603758 881 ntBASIC2.75□□□□□ -1.97
RPL39P62891 AL390816.3-201ENST00000604527 1066 ntBASIC2.75□□□□□ -1.97
RPL39P62891 Z82195.1-201ENST00000604558 398 ntBASIC2.75□□□□□ -1.97
RPL39P62891 AC006946.3-201ENST00000609791 756 ntBASIC2.75□□□□□ -1.97
RPL39P62891 AC091953.3-201ENST00000623220 236 ntBASIC2.75□□□□□ -1.97
RPL39P62891 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC2.75□□□□□ -1.97
RPL39P62891 ATE1-AS1-202ENST00000636460 506 ntBASIC2.75□□□□□ -1.97
RPL39P62891 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.75□□□□□ -1.97
RPL39P62891 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.75□□□□□ -1.97
RPL39P62891 AC005261.2-201ENST00000593427 4258 ntBASIC2.75□□□□□ -1.97
RPL39P62891 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC2.75□□□□□ -1.97
RPL39P62891 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC2.74□□□□□ -1.97
RPL39P62891 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.74□□□□□ -1.97
RPL39P62891 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
RPL39P62891 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RPL39P62891 THAP12P8-201ENST00000447914 2115 ntBASIC2.74□□□□□ -1.97
RPL39P62891 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
RPL39P62891 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RPL39P62891 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RPL39P62891 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.74□□□□□ -1.97
RPL39P62891 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RPL39P62891 RNA5SP399-201ENST00000364003 117 ntBASIC2.74□□□□□ -1.97
RPL39P62891 AL035696.2-201ENST00000407941 709 ntBASIC2.74□□□□□ -1.97
RPL39P62891 RNU4-25P-201ENST00000410569 230 ntBASIC2.74□□□□□ -1.97
RPL39P62891 HSPE1P12-201ENST00000412576 301 ntBASIC2.74□□□□□ -1.97
RPL39P62891 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC2.74□□□□□ -1.97
RPL39P62891 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC2.74□□□□□ -1.97
RPL39P62891 BX510359.3-201ENST00000422168 306 ntBASIC2.74□□□□□ -1.97
RPL39P62891 RPL21P109-201ENST00000422213 475 ntBASIC2.74□□□□□ -1.97
RPL39P62891 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC2.74□□□□□ -1.97
RPL39P62891 AL627308.1-201ENST00000435693 821 ntBASIC2.74□□□□□ -1.97
RPL39P62891 AC083863.1-201ENST00000438811 231 ntBASIC2.74□□□□□ -1.97
RPL39P62891 AC073264.2-201ENST00000448886 166 ntBASIC2.74□□□□□ -1.97
RPL39P62891 AC098824.1-201ENST00000453565 980 ntBASIC2.74□□□□□ -1.97
RPL39P62891 RPL23AP24-201ENST00000458203 385 ntBASIC2.74□□□□□ -1.97
RPL39P62891 RPL38P1-201ENST00000460914 211 ntBASIC2.74□□□□□ -1.97
RPL39P62891 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms