Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.82□□□□□ -1.8
ACTBP60709 PCNPP1-201ENST00000552501 511 ntBASIC3.82□□□□□ -1.8
ACTBP60709 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.82□□□□□ -1.8
ACTBP60709 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.82□□□□□ -1.8
ACTBP60709 AL031320.1-201ENST00000604177 357 ntBASIC3.82□□□□□ -1.8
ACTBP60709 MIR432-201ENST00000606207 94 ntBASIC3.82□□□□□ -1.8
ACTBP60709 Z98200.1-201ENST00000607298 470 ntBASIC3.82□□□□□ -1.8
ACTBP60709 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.82□□□□□ -1.8
ACTBP60709 AC123768.4-201ENST00000616244 701 ntBASIC3.82□□□□□ -1.8
ACTBP60709 AC087385.3-201ENST00000620477 187 ntBASIC3.82□□□□□ -1.8
ACTBP60709 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.82□□□□□ -1.8
ACTBP60709 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ACTBP60709 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ACTBP60709 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ACTBP60709 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.81□□□□□ -1.8
ACTBP60709 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ACTBP60709 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.81□□□□□ -1.8
ACTBP60709 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.81□□□□□ -1.8
ACTBP60709 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACTBP60709 AL031985.3-201ENST00000565390 2449 ntBASIC3.81□□□□□ -1.8
ACTBP60709 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACTBP60709 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ACTBP60709 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACTBP60709 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ACTBP60709 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACTBP60709 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
ACTBP60709 AC010132.2-201ENST00000295493 1043 ntBASIC3.81□□□□□ -1.8
ACTBP60709 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ACTBP60709 RNA5SP388-201ENST00000362584 119 ntBASIC3.81□□□□□ -1.8
ACTBP60709 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTBP60709 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ACTBP60709 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ACTBP60709 AL109941.1-201ENST00000401925 229 ntBASIC3.81□□□□□ -1.8
ACTBP60709 AMZ2P2-201ENST00000406819 1057 ntBASIC3.81□□□□□ -1.8
ACTBP60709 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTBP60709 AC006455.6-201ENST00000426192 893 ntBASIC3.81□□□□□ -1.8
ACTBP60709 TRGV7-201ENST00000427089 353 ntBASIC3.81□□□□□ -1.8
ACTBP60709 OR2B7P-201ENST00000429302 934 ntBASIC3.81□□□□□ -1.8
ACTBP60709 YWHAEP5-201ENST00000431545 765 ntBASIC3.81□□□□□ -1.8
ACTBP60709 GSTA7P-201ENST00000438425 448 ntBASIC3.81□□□□□ -1.8
ACTBP60709 AC073648.4-201ENST00000442655 781 ntBASIC3.81□□□□□ -1.8
ACTBP60709 RPL31P44-201ENST00000447680 377 ntBASIC3.81□□□□□ -1.8
ACTBP60709 AC104763.1-201ENST00000475274 360 ntBASIC3.81□□□□□ -1.8
ACTBP60709 AC146944.2-203ENST00000502493 354 ntBASIC3.81□□□□□ -1.8
ACTBP60709 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ACTBP60709 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.81□□□□□ -1.8
ACTBP60709 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTBP60709 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTBP60709 AC139495.1-202ENST00000513164 354 ntBASIC3.81□□□□□ -1.8
ACTBP60709 AC108471.1-201ENST00000513977 287 ntBASIC3.81□□□□□ -1.8
ACTBP60709 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTBP60709 AP001880.2-201ENST00000538233 448 ntBASIC3.81□□□□□ -1.8
ACTBP60709 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTBP60709 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ACTBP60709 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTBP60709 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.81□□□□□ -1.8
ACTBP60709 MIR3934-201ENST00000579806 107 ntBASIC3.81□□□□□ -1.8
ACTBP60709 MIR3667-201ENST00000581025 74 ntBASIC3.81□□□□□ -1.8
ACTBP60709 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.81□□□□□ -1.8
ACTBP60709 AL512782.1-201ENST00000603093 364 ntBASIC3.81□□□□□ -1.8
ACTBP60709 AC015922.4-201ENST00000612568 690 ntBASIC3.81□□□□□ -1.8
ACTBP60709 AC233309.1-201ENST00000619522 751 ntBASIC3.81□□□□□ -1.8
ACTBP60709 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ACTBP60709 AL049536.1-201ENST00000625043 744 ntBASIC3.81□□□□□ -1.8
ACTBP60709 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACTBP60709 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
ACTBP60709 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ACTBP60709 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.81□□□□□ -1.8
ACTBP60709 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.81□□□□□ -1.8
ACTBP60709 LINC00622-201ENST00000562811 1570 ntBASIC3.8□□□□□ -1.8
ACTBP60709 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ACTBP60709 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
ACTBP60709 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ACTBP60709 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ACTBP60709 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ACTBP60709 RNA5SP191-201ENST00000362585 102 ntBASIC3.8□□□□□ -1.8
ACTBP60709 SNORA71.2-201ENST00000364941 134 ntBASIC3.8□□□□□ -1.8
ACTBP60709 SDHCP2-201ENST00000398565 501 ntBASIC3.8□□□□□ -1.8
ACTBP60709 AL034403.1-201ENST00000399414 885 ntBASIC3.8□□□□□ -1.8
ACTBP60709 RNA5SP113-201ENST00000410486 84 ntBASIC3.8□□□□□ -1.8
ACTBP60709 RNA5SP39-201ENST00000411245 120 ntBASIC3.8□□□□□ -1.8
ACTBP60709 RBMY1KP-201ENST00000423480 476 ntBASIC3.8□□□□□ -1.8
ACTBP60709 NRBF2P3-201ENST00000432731 865 ntBASIC3.8□□□□□ -1.8
ACTBP60709 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ACTBP60709 RAB28P3-201ENST00000448325 597 ntBASIC3.8□□□□□ -1.8
ACTBP60709 ABCF2P2-201ENST00000450549 296 ntBASIC3.8□□□□□ -1.8
ACTBP60709 CALM1P2-201ENST00000452941 448 ntBASIC3.8□□□□□ -1.8
ACTBP60709 AC091685.2-201ENST00000454924 864 ntBASIC3.8□□□□□ -1.8
ACTBP60709 RPS3AP41-201ENST00000462701 778 ntBASIC3.8□□□□□ -1.8
ACTBP60709 SCARNA22-201ENST00000503991 125 ntBASIC3.8□□□□□ -1.8
ACTBP60709 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.8□□□□□ -1.8
ACTBP60709 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.8□□□□□ -1.8
ACTBP60709 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.8□□□□□ -1.8
ACTBP60709 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.8□□□□□ -1.8
ACTBP60709 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.8□□□□□ -1.8
ACTBP60709 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
ACTBP60709 OR4C2P-201ENST00000530855 1064 ntBASIC3.8□□□□□ -1.8
ACTBP60709 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.8□□□□□ -1.8
ACTBP60709 AL161713.1-201ENST00000555538 145 ntBASIC3.8□□□□□ -1.8
ACTBP60709 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms